Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1084 and DvMF_1085 are separated by 67 nucleotides DvMF_1085 and DvMF_1086 are separated by 9 nucleotides DvMF_1086 and DvMF_1087 are separated by 397 nucleotides
DvMF_1084: DvMF_1084 - OmpA/MotB domain protein (RefSeq), at 1,323,133 to 1,323,858
_1084
DvMF_1085: DvMF_1085 - flagellar motor protein MotA (RefSeq), at 1,323,926 to 1,324,771
_1085
DvMF_1086: DvMF_1086 - hypothetical protein (RefSeq), at 1,324,781 to 1,325,494
_1086
DvMF_1087: DvMF_1087 - hypothetical protein (RefSeq), at 1,325,892 to 1,326,509
_1087
Position (kb)
1324
1325
1326 Strain fitness (log2 ratio)
-1
0
1
2 at 1324.062 kb on + strand, within DvMF_1085 at 1324.072 kb on - strand, within DvMF_1085 at 1324.138 kb on - strand, within DvMF_1085 at 1324.167 kb on + strand, within DvMF_1085 at 1324.232 kb on - strand, within DvMF_1085 at 1324.608 kb on - strand, within DvMF_1085 at 1324.608 kb on - strand, within DvMF_1085 at 1324.857 kb on - strand, within DvMF_1086 at 1325.112 kb on + strand, within DvMF_1086 at 1325.236 kb on + strand, within DvMF_1086 at 1325.294 kb on + strand, within DvMF_1086 at 1325.442 kb on + strand at 1325.640 kb on + strand at 1325.712 kb on + strand at 1325.915 kb on - strand at 1326.056 kb on + strand, within DvMF_1087 at 1326.110 kb on - strand, within DvMF_1087 at 1326.259 kb on - strand, within DvMF_1087 at 1326.264 kb on + strand, within DvMF_1087 at 1326.340 kb on + strand, within DvMF_1087 at 1326.422 kb on - strand, within DvMF_1087 at 1326.464 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,324,062 + DvMF_1085 0.16 +1.8 1,324,072 - DvMF_1085 0.17 +2.0 1,324,138 - DvMF_1085 0.25 +1.9 1,324,167 + DvMF_1085 0.28 +1.9 1,324,232 - DvMF_1085 0.36 +2.0 1,324,608 - DvMF_1085 0.81 +2.3 1,324,608 - DvMF_1085 0.81 +1.9 1,324,857 - DvMF_1086 0.11 -0.4 1,325,112 + DvMF_1086 0.46 -0.2 1,325,236 + DvMF_1086 0.64 +2.1 1,325,294 + DvMF_1086 0.72 -0.4 1,325,442 + +0.3 1,325,640 + +0.5 1,325,712 + -0.2 1,325,915 - +0.0 1,326,056 + DvMF_1087 0.27 -0.7 1,326,110 - DvMF_1087 0.35 -0.8 1,326,259 - DvMF_1087 0.59 +0.6 1,326,264 + DvMF_1087 0.60 +0.1 1,326,340 + DvMF_1087 0.72 -0.4 1,326,422 - DvMF_1087 0.86 -0.6 1,326,464 - -0.5
Or see this region's nucleotide sequence