Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1054 and DvMF_1055 are separated by 554 nucleotides DvMF_1055 and DvMF_1056 are separated by 161 nucleotides DvMF_1056 and DvMF_1057 are separated by 268 nucleotides
DvMF_1054: DvMF_1054 - protein of unknown function DUF1499 (RefSeq), at 1,290,974 to 1,291,501
_1054
DvMF_1055: DvMF_1055 - Mg2 transporter protein CorA family protein (RefSeq), at 1,292,056 to 1,292,988
_1055
DvMF_1056: DvMF_1056 - no description, at 1,293,150 to 1,293,528
_1056
DvMF_1057: DvMF_1057 - methyl-accepting chemotaxis sensory transducer with Cache sensor (RefSeq), at 1,293,797 to 1,295,701
_1057
Position (kb)
1292
1293 Strain fitness (log2 ratio)
-2
-1
0
1 at 1291.152 kb on + strand, within DvMF_1054 at 1291.777 kb on + strand at 1291.956 kb on - strand at 1292.319 kb on + strand, within DvMF_1055 at 1292.327 kb on - strand, within DvMF_1055 at 1292.557 kb on + strand, within DvMF_1055 at 1292.877 kb on + strand, within DvMF_1055 at 1293.089 kb on + strand at 1293.358 kb on - strand, within DvMF_1056 at 1293.468 kb on - strand, within DvMF_1056 at 1293.590 kb on - strand at 1293.778 kb on + strand at 1293.829 kb on - strand at 1293.844 kb on + strand at 1293.880 kb on - strand at 1293.890 kb on - strand at 1293.972 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,291,152 + DvMF_1054 0.34 -0.8 1,291,777 + -0.2 1,291,956 - +0.8 1,292,319 + DvMF_1055 0.28 -0.6 1,292,327 - DvMF_1055 0.29 -0.4 1,292,557 + DvMF_1055 0.54 -0.4 1,292,877 + DvMF_1055 0.88 -0.6 1,293,089 + -0.7 1,293,358 - DvMF_1056 0.55 -0.0 1,293,468 - DvMF_1056 0.84 -0.2 1,293,590 - -0.2 1,293,778 + -0.7 1,293,829 - -0.5 1,293,844 + -0.6 1,293,880 - -1.0 1,293,890 - -0.3 1,293,972 + -1.9
Or see this region's nucleotide sequence