Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1037 and DvMF_1038 are separated by 325 nucleotides DvMF_1038 and DvMF_1039 are separated by 32 nucleotides
DvMF_1037: DvMF_1037 - peptidase A24A domain protein (RefSeq), at 1,258,958 to 1,259,761
_1037
DvMF_1038: DvMF_1038 - twitching motility protein (RefSeq), at 1,260,087 to 1,261,205
_1038
DvMF_1039: DvMF_1039 - Type II secretory pathway component ExeA (predicted ATPase)-like protein (RefSeq), at 1,261,238 to 1,263,280
_1039
Position (kb)
1260
1261
1262 Strain fitness (log2 ratio)
-1
0
1 at 1259.187 kb on - strand, within DvMF_1037 at 1259.306 kb on + strand, within DvMF_1037 at 1259.429 kb on + strand, within DvMF_1037 at 1259.655 kb on + strand, within DvMF_1037 at 1259.712 kb on - strand at 1259.758 kb on - strand at 1259.873 kb on - strand at 1260.332 kb on - strand, within DvMF_1038 at 1260.549 kb on - strand, within DvMF_1038 at 1260.604 kb on + strand, within DvMF_1038 at 1260.663 kb on + strand, within DvMF_1038 at 1260.717 kb on - strand, within DvMF_1038 at 1260.784 kb on - strand, within DvMF_1038 at 1260.993 kb on - strand, within DvMF_1038 at 1261.044 kb on - strand, within DvMF_1038 at 1261.095 kb on + strand at 1261.511 kb on - strand, within DvMF_1039 at 1261.797 kb on + strand, within DvMF_1039 at 1261.830 kb on + strand, within DvMF_1039 at 1261.883 kb on + strand, within DvMF_1039 at 1261.955 kb on - strand, within DvMF_1039 at 1262.011 kb on + strand, within DvMF_1039
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,259,187 - DvMF_1037 0.28 +0.4 1,259,306 + DvMF_1037 0.43 -0.5 1,259,429 + DvMF_1037 0.59 -0.4 1,259,655 + DvMF_1037 0.87 -0.4 1,259,712 - -0.3 1,259,758 - -0.8 1,259,873 - +0.2 1,260,332 - DvMF_1038 0.22 +0.2 1,260,549 - DvMF_1038 0.41 +0.3 1,260,604 + DvMF_1038 0.46 +0.0 1,260,663 + DvMF_1038 0.51 +0.4 1,260,717 - DvMF_1038 0.56 +0.3 1,260,784 - DvMF_1038 0.62 -0.1 1,260,993 - DvMF_1038 0.81 -0.2 1,261,044 - DvMF_1038 0.86 +0.3 1,261,095 + +0.1 1,261,511 - DvMF_1039 0.13 +0.2 1,261,797 + DvMF_1039 0.27 -0.6 1,261,830 + DvMF_1039 0.29 +0.1 1,261,883 + DvMF_1039 0.32 -0.1 1,261,955 - DvMF_1039 0.35 -0.3 1,262,011 + DvMF_1039 0.38 -0.4
Or see this region's nucleotide sequence