Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0993 and DvMF_0994 are separated by 209 nucleotides DvMF_0994 and DvMF_0995 are separated by 144 nucleotides DvMF_0995 and gltX are separated by 478 nucleotides
DvMF_0993: DvMF_0993 - transcriptional regulator, Crp/Fnr family (RefSeq), at 1,207,197 to 1,207,886
_0993
DvMF_0994: DvMF_0994 - hypothetical protein (RefSeq), at 1,208,096 to 1,208,602
_0994
DvMF_0995: DvMF_0995 - metal dependent phosphohydrolase (RefSeq), at 1,208,747 to 1,210,003
_0995
DvMF_0996: gltX - glutamyl-tRNA synthetase (RefSeq), at 1,210,482 to 1,211,876
gltX
Position (kb) 1208
1209
1210
1211 Strain fitness (log2 ratio) -2
-1
0
1 at 1207.799 kb on - strand, within DvMF_0993 at 1208.259 kb on + strand, within DvMF_0994 at 1208.259 kb on + strand, within DvMF_0994 at 1208.561 kb on + strand at 1208.729 kb on - strand at 1209.433 kb on + strand, within DvMF_0995 at 1209.583 kb on + strand, within DvMF_0995 at 1209.789 kb on - strand, within DvMF_0995 at 1209.824 kb on - strand, within DvMF_0995 at 1210.017 kb on - strand at 1210.212 kb on - strand at 1210.339 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,207,799 - DvMF_0993 0.87 -0.3 1,208,259 + DvMF_0994 0.32 -0.6 1,208,259 + DvMF_0994 0.32 -0.6 1,208,561 + -0.3 1,208,729 - -0.7 1,209,433 + DvMF_0995 0.55 -1.0 1,209,583 + DvMF_0995 0.67 -0.1 1,209,789 - DvMF_0995 0.83 -1.3 1,209,824 - DvMF_0995 0.86 -0.8 1,210,017 - -0.8 1,210,212 - -2.0 1,210,339 - -0.8
Or see this region's nucleotide sequence