Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0990 and DvMF_0991 overlap by 17 nucleotides DvMF_0991 and DvMF_0992 are separated by 96 nucleotides DvMF_0992 and DvMF_0993 are separated by 206 nucleotides
DvMF_0990: DvMF_0990 - iron-containing alcohol dehydrogenase (RefSeq), at 1,203,243 to 1,204,403
_0990
DvMF_0991: DvMF_0991 - signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq), at 1,204,387 to 1,206,210
_0991
DvMF_0992: DvMF_0992 - hypothetical protein (RefSeq), at 1,206,307 to 1,206,990
_0992
DvMF_0993: DvMF_0993 - transcriptional regulator, Crp/Fnr family (RefSeq), at 1,207,197 to 1,207,886
_0993
Position (kb)
1204
1205
1206
1207 Strain fitness (log2 ratio)
-1
0
1
2 at 1203.512 kb on + strand, within DvMF_0990 at 1203.554 kb on - strand, within DvMF_0990 at 1203.554 kb on - strand, within DvMF_0990 at 1203.554 kb on - strand, within DvMF_0990 at 1203.556 kb on + strand, within DvMF_0990 at 1203.556 kb on + strand, within DvMF_0990 at 1203.596 kb on + strand, within DvMF_0990 at 1203.626 kb on + strand, within DvMF_0990 at 1203.634 kb on - strand, within DvMF_0990 at 1203.851 kb on + strand, within DvMF_0990 at 1203.852 kb on + strand, within DvMF_0990 at 1204.040 kb on - strand, within DvMF_0990 at 1204.049 kb on - strand, within DvMF_0990 at 1204.085 kb on + strand, within DvMF_0990 at 1204.277 kb on + strand, within DvMF_0990 at 1204.372 kb on + strand at 1204.620 kb on - strand, within DvMF_0991 at 1204.699 kb on - strand, within DvMF_0991 at 1204.804 kb on - strand, within DvMF_0991 at 1204.898 kb on + strand, within DvMF_0991 at 1205.016 kb on + strand, within DvMF_0991 at 1205.053 kb on - strand, within DvMF_0991 at 1205.118 kb on - strand, within DvMF_0991 at 1205.193 kb on - strand, within DvMF_0991 at 1205.356 kb on - strand, within DvMF_0991 at 1205.378 kb on + strand, within DvMF_0991 at 1205.839 kb on - strand, within DvMF_0991 at 1206.205 kb on + strand at 1206.205 kb on + strand at 1206.293 kb on + strand at 1206.322 kb on - strand at 1206.741 kb on + strand, within DvMF_0992 at 1206.749 kb on - strand, within DvMF_0992 at 1206.804 kb on + strand, within DvMF_0992 at 1206.811 kb on - strand, within DvMF_0992 at 1207.157 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,203,512 + DvMF_0990 0.23 -1.2 1,203,554 - DvMF_0990 0.27 +0.2 1,203,554 - DvMF_0990 0.27 -1.3 1,203,554 - DvMF_0990 0.27 -1.1 1,203,556 + DvMF_0990 0.27 +0.1 1,203,556 + DvMF_0990 0.27 -0.9 1,203,596 + DvMF_0990 0.30 -0.3 1,203,626 + DvMF_0990 0.33 -1.1 1,203,634 - DvMF_0990 0.34 -1.2 1,203,851 + DvMF_0990 0.52 -1.1 1,203,852 + DvMF_0990 0.52 -0.6 1,204,040 - DvMF_0990 0.69 -0.1 1,204,049 - DvMF_0990 0.69 -0.2 1,204,085 + DvMF_0990 0.73 -0.4 1,204,277 + DvMF_0990 0.89 +2.0 1,204,372 + -0.4 1,204,620 - DvMF_0991 0.13 -1.0 1,204,699 - DvMF_0991 0.17 -0.8 1,204,804 - DvMF_0991 0.23 -1.3 1,204,898 + DvMF_0991 0.28 -1.3 1,205,016 + DvMF_0991 0.34 -1.2 1,205,053 - DvMF_0991 0.37 -1.0 1,205,118 - DvMF_0991 0.40 -1.4 1,205,193 - DvMF_0991 0.44 +0.1 1,205,356 - DvMF_0991 0.53 -1.1 1,205,378 + DvMF_0991 0.54 -1.2 1,205,839 - DvMF_0991 0.80 -1.0 1,206,205 + -0.4 1,206,205 + -0.9 1,206,293 + -0.6 1,206,322 - -0.6 1,206,741 + DvMF_0992 0.63 -0.9 1,206,749 - DvMF_0992 0.65 +0.1 1,206,804 + DvMF_0992 0.73 +1.5 1,206,811 - DvMF_0992 0.74 -0.9 1,207,157 + +0.3
Or see this region's nucleotide sequence