Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0965 and DvMF_0966 are separated by 121 nucleotides DvMF_0966 and DvMF_0967 are separated by 283 nucleotides
DvMF_0965: DvMF_0965 - pyruvate kinase (RefSeq), at 1,170,875 to 1,172,287
_0965
DvMF_0966: DvMF_0966 - metal dependent phosphohydrolase (RefSeq), at 1,172,409 to 1,173,440
_0966
DvMF_0967: DvMF_0967 - putative transcriptional regulator, XRE family (RefSeq), at 1,173,724 to 1,174,221
_0967
Position (kb)
1172
1173
1174 Strain fitness (log2 ratio)
-1
0
1
2 at 1171.548 kb on - strand, within DvMF_0965 at 1171.712 kb on + strand, within DvMF_0965 at 1172.140 kb on - strand, within DvMF_0965 at 1172.397 kb on - strand at 1172.597 kb on - strand, within DvMF_0966 at 1172.608 kb on - strand, within DvMF_0966 at 1172.647 kb on + strand, within DvMF_0966 at 1172.734 kb on + strand, within DvMF_0966 at 1172.742 kb on - strand, within DvMF_0966 at 1172.982 kb on + strand, within DvMF_0966 at 1172.990 kb on - strand, within DvMF_0966 at 1172.990 kb on - strand, within DvMF_0966 at 1173.036 kb on - strand, within DvMF_0966 at 1173.036 kb on - strand, within DvMF_0966 at 1173.053 kb on + strand, within DvMF_0966 at 1173.189 kb on - strand, within DvMF_0966 at 1173.200 kb on + strand, within DvMF_0966 at 1173.358 kb on - strand at 1173.591 kb on + strand at 1173.637 kb on + strand at 1173.640 kb on - strand at 1173.792 kb on - strand, within DvMF_0967 at 1174.067 kb on + strand, within DvMF_0967
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,171,548 - DvMF_0965 0.48 +2.5 1,171,712 + DvMF_0965 0.59 +1.9 1,172,140 - DvMF_0965 0.90 +0.7 1,172,397 - -0.4 1,172,597 - DvMF_0966 0.18 -0.4 1,172,608 - DvMF_0966 0.19 +0.5 1,172,647 + DvMF_0966 0.23 +0.5 1,172,734 + DvMF_0966 0.31 +0.7 1,172,742 - DvMF_0966 0.32 -0.2 1,172,982 + DvMF_0966 0.56 +0.5 1,172,990 - DvMF_0966 0.56 +0.7 1,172,990 - DvMF_0966 0.56 +0.6 1,173,036 - DvMF_0966 0.61 +0.4 1,173,036 - DvMF_0966 0.61 +0.4 1,173,053 + DvMF_0966 0.62 +0.9 1,173,189 - DvMF_0966 0.76 +0.3 1,173,200 + DvMF_0966 0.77 +0.8 1,173,358 - +0.6 1,173,591 + -0.2 1,173,637 + -0.6 1,173,640 - -0.4 1,173,792 - DvMF_0967 0.14 -0.2 1,174,067 + DvMF_0967 0.69 -0.2
Or see this region's nucleotide sequence