Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0907 and DvMF_0908 are separated by 544 nucleotides DvMF_0908 and DvMF_0909 are separated by 76 nucleotides
DvMF_0907: DvMF_0907 - NADH dehydrogenase (ubiquinone) (RefSeq), at 1,090,604 to 1,091,962
_0907
DvMF_0908: DvMF_0908 - histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) , at 1,092,507 to 1,093,670
_0908
DvMF_0909: DvMF_0909 - cytidylate kinase (RefSeq), at 1,093,747 to 1,094,406
_0909
Position (kb)
1092
1093
1094 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 1091.520 kb on - strand, within DvMF_0907 at 1091.662 kb on - strand, within DvMF_0907 at 1091.729 kb on - strand, within DvMF_0907 at 1092.095 kb on - strand at 1092.180 kb on + strand at 1092.285 kb on + strand at 1092.295 kb on + strand at 1092.303 kb on + strand at 1092.303 kb on - strand at 1092.563 kb on + strand at 1092.568 kb on + strand at 1092.571 kb on - strand at 1092.871 kb on - strand, within DvMF_0908 at 1092.874 kb on + strand, within DvMF_0908 at 1092.884 kb on + strand, within DvMF_0908 at 1093.008 kb on - strand, within DvMF_0908 at 1093.037 kb on - strand, within DvMF_0908 at 1093.190 kb on - strand, within DvMF_0908 at 1093.387 kb on + strand, within DvMF_0908 at 1093.427 kb on + strand, within DvMF_0908 at 1093.497 kb on + strand, within DvMF_0908 at 1093.573 kb on + strand at 1093.696 kb on + strand at 1093.928 kb on + strand, within DvMF_0909 at 1094.251 kb on + strand, within DvMF_0909 at 1094.272 kb on + strand, within DvMF_0909
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,091,520 - DvMF_0907 0.67 -0.1 1,091,662 - DvMF_0907 0.78 -0.3 1,091,729 - DvMF_0907 0.83 -0.3 1,092,095 - -0.2 1,092,180 + -1.0 1,092,285 + -0.3 1,092,295 + -0.4 1,092,303 + -0.1 1,092,303 - +0.1 1,092,563 + -4.2 1,092,568 + -6.2 1,092,571 - -5.2 1,092,871 - DvMF_0908 0.31 -5.7 1,092,874 + DvMF_0908 0.32 -4.5 1,092,884 + DvMF_0908 0.32 -5.7 1,093,008 - DvMF_0908 0.43 -5.6 1,093,037 - DvMF_0908 0.46 -5.9 1,093,190 - DvMF_0908 0.59 -4.7 1,093,387 + DvMF_0908 0.76 -6.8 1,093,427 + DvMF_0908 0.79 -5.5 1,093,497 + DvMF_0908 0.85 -4.2 1,093,573 + -5.7 1,093,696 + -0.4 1,093,928 + DvMF_0909 0.27 -0.2 1,094,251 + DvMF_0909 0.76 +0.0 1,094,272 + DvMF_0909 0.80 +0.1
Or see this region's nucleotide sequence