Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0786 and DvMF_0787 are separated by 230 nucleotides DvMF_0787 and DvMF_0788 are separated by 341 nucleotides
DvMF_0786: DvMF_0786 - flagellin domain protein (RefSeq), at 943,451 to 944,338
_0786
DvMF_0787: DvMF_0787 - (p)ppGpp synthetase I, SpoT/RelA (RefSeq), at 944,569 to 946,737
_0787
DvMF_0788: DvMF_0788 - extracellular solute-binding protein family 5 (RefSeq), at 947,079 to 948,809
_0788
Position (kb) 944
945
946
947 Strain fitness (log2 ratio) -2
-1
0
1
2 at 943.948 kb on - strand, within DvMF_0786 at 943.948 kb on - strand, within DvMF_0786 at 943.948 kb on - strand, within DvMF_0786 at 944.060 kb on + strand, within DvMF_0786 at 944.069 kb on + strand, within DvMF_0786 at 944.140 kb on - strand, within DvMF_0786 at 944.140 kb on - strand, within DvMF_0786 at 944.193 kb on - strand, within DvMF_0786 at 944.194 kb on - strand, within DvMF_0786 at 944.293 kb on + strand at 944.360 kb on - strand at 944.535 kb on - strand at 945.416 kb on - strand, within DvMF_0787 at 945.416 kb on - strand, within DvMF_0787 at 945.510 kb on - strand, within DvMF_0787 at 945.571 kb on + strand, within DvMF_0787 at 945.594 kb on + strand, within DvMF_0787 at 945.834 kb on - strand, within DvMF_0787 at 945.868 kb on - strand, within DvMF_0787 at 945.881 kb on + strand, within DvMF_0787 at 946.399 kb on - strand, within DvMF_0787 at 946.530 kb on + strand at 946.584 kb on + strand at 946.621 kb on - strand at 947.009 kb on + strand at 947.084 kb on - strand at 947.108 kb on - strand at 947.394 kb on - strand, within DvMF_0788 at 947.667 kb on - strand, within DvMF_0788
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 943,948 - DvMF_0786 0.56 -0.6 943,948 - DvMF_0786 0.56 +2.2 943,948 - DvMF_0786 0.56 -0.0 944,060 + DvMF_0786 0.69 -0.7 944,069 + DvMF_0786 0.70 -0.4 944,140 - DvMF_0786 0.78 -0.4 944,140 - DvMF_0786 0.78 +1.6 944,193 - DvMF_0786 0.84 -0.4 944,194 - DvMF_0786 0.84 -0.4 944,293 + -0.7 944,360 - -0.4 944,535 - -0.4 945,416 - DvMF_0787 0.39 -0.8 945,416 - DvMF_0787 0.39 +0.2 945,510 - DvMF_0787 0.43 +0.8 945,571 + DvMF_0787 0.46 -0.2 945,594 + DvMF_0787 0.47 -1.0 945,834 - DvMF_0787 0.58 +0.2 945,868 - DvMF_0787 0.60 -1.3 945,881 + DvMF_0787 0.60 -1.0 946,399 - DvMF_0787 0.84 +0.4 946,530 + +0.2 946,584 + -2.5 946,621 - +0.4 947,009 + -0.2 947,084 - -0.9 947,108 - -0.5 947,394 - DvMF_0788 0.18 +0.2 947,667 - DvMF_0788 0.34 -0.8
Or see this region's nucleotide sequence