Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0780 and DvMF_R0022 are separated by 374 nucleotides DvMF_R0022 and DvMF_0781 are separated by 448 nucleotides DvMF_0781 and DvMF_0782 are separated by 346 nucleotides
DvMF_0780: DvMF_0780 - response regulator receiver modulated CheB methylesterase (RefSeq), at 936,260 to 937,402
_0780
DvMF_R0022: DvMF_R0022 - tRNA-Pro (RefSeq), at 937,777 to 937,854
_R0022
DvMF_0781: DvMF_0781 - NLP/P60 protein (RefSeq), at 938,303 to 939,085
_0781
DvMF_0782: DvMF_0782 - hypothetical protein (RefSeq), at 939,432 to 939,974
_0782
Position (kb) 938
939
940 Strain fitness (log2 ratio) -1
0
1
2 at 937.536 kb on + strand at 937.937 kb on + strand at 938.030 kb on + strand at 938.046 kb on + strand at 938.074 kb on - strand at 938.261 kb on - strand at 938.380 kb on + strand at 938.384 kb on - strand, within DvMF_0781 at 938.389 kb on - strand, within DvMF_0781 at 938.497 kb on + strand, within DvMF_0781 at 938.813 kb on - strand, within DvMF_0781 at 938.973 kb on + strand, within DvMF_0781 at 939.162 kb on - strand at 939.278 kb on - strand at 939.283 kb on - strand at 939.297 kb on + strand at 940.084 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 937,536 + -0.5 937,937 + +0.3 938,030 + -0.3 938,046 + -0.5 938,074 - -0.3 938,261 - +0.6 938,380 + -0.2 938,384 - DvMF_0781 0.10 +2.1 938,389 - DvMF_0781 0.11 +0.2 938,497 + DvMF_0781 0.25 -0.2 938,813 - DvMF_0781 0.65 +0.5 938,973 + DvMF_0781 0.86 -0.6 939,162 - -0.4 939,278 - -0.4 939,283 - -0.4 939,297 + -0.8 940,084 + -0.4
Or see this region's nucleotide sequence