Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0776 and DvMF_0777 overlap by 4 nucleotides DvMF_0777 and DvMF_0778 are separated by 135 nucleotides DvMF_0778 and DvMF_0779 overlap by 1 nucleotides
DvMF_0776: DvMF_0776 - CheW protein (RefSeq), at 931,694 to 932,380
_0776
DvMF_0777: DvMF_0777 - Cobyrinic acid ac-diamide synthase (RefSeq), at 932,377 to 933,150
_0777
DvMF_0778: DvMF_0778 - MCP methyltransferase, CheR-type (RefSeq), at 933,286 to 934,164
_0778
DvMF_0779: DvMF_0779 - PBS lyase HEAT domain protein repeat-containing protein (RefSeq), at 934,164 to 936,089
_0779
Position (kb) 933
934
935 Strain fitness (log2 ratio) -1
0
1 at 932.461 kb on - strand, within DvMF_0777 at 932.461 kb on - strand, within DvMF_0777 at 932.893 kb on - strand, within DvMF_0777 at 933.095 kb on - strand at 933.154 kb on - strand at 933.272 kb on - strand at 933.571 kb on - strand, within DvMF_0778 at 933.622 kb on + strand, within DvMF_0778 at 933.842 kb on - strand, within DvMF_0778 at 934.711 kb on - strand, within DvMF_0779 at 934.755 kb on - strand, within DvMF_0779 at 934.843 kb on + strand, within DvMF_0779 at 935.021 kb on - strand, within DvMF_0779 at 935.081 kb on + strand, within DvMF_0779
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 932,461 - DvMF_0777 0.11 -0.4 932,461 - DvMF_0777 0.11 -0.8 932,893 - DvMF_0777 0.67 -0.1 933,095 - +0.4 933,154 - -0.4 933,272 - -0.6 933,571 - DvMF_0778 0.32 -1.1 933,622 + DvMF_0778 0.38 -0.7 933,842 - DvMF_0778 0.63 -1.1 934,711 - DvMF_0779 0.28 -0.3 934,755 - DvMF_0779 0.31 +0.4 934,843 + DvMF_0779 0.35 +0.1 935,021 - DvMF_0779 0.44 -0.6 935,081 + DvMF_0779 0.48 -1.5
Or see this region's nucleotide sequence