Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0768 and DvMF_0769 are separated by 136 nucleotides DvMF_0769 and DvMF_0770 overlap by 4 nucleotides DvMF_0770 and DvMF_0771 are separated by 55 nucleotides
DvMF_0768: DvMF_0768 - response regulator receiver modulated diguanylate cyclase (RefSeq), at 921,576 to 922,637
_0768
DvMF_0769: DvMF_0769 - metal dependent phosphohydrolase (RefSeq), at 922,774 to 923,613
_0769
DvMF_0770: DvMF_0770 - hypothetical protein (RefSeq), at 923,610 to 924,104
_0770
DvMF_0771: DvMF_0771 - DNA protecting protein DprA (RefSeq), at 924,160 to 925,821
_0771
Position (kb) 922
923
924 Strain fitness (log2 ratio) -1
0
1 at 922.034 kb on - strand, within DvMF_0768 at 922.291 kb on - strand, within DvMF_0768 at 922.394 kb on - strand, within DvMF_0768 at 922.572 kb on + strand at 923.258 kb on + strand, within DvMF_0769 at 923.519 kb on - strand, within DvMF_0769 at 923.845 kb on - strand, within DvMF_0770 at 923.974 kb on + strand, within DvMF_0770 at 924.197 kb on + strand at 924.237 kb on + strand at 924.307 kb on + strand at 924.342 kb on + strand, within DvMF_0771
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 922,034 - DvMF_0768 0.43 +0.2 922,291 - DvMF_0768 0.67 -0.4 922,394 - DvMF_0768 0.77 -0.4 922,572 + +0.2 923,258 + DvMF_0769 0.58 +1.3 923,519 - DvMF_0769 0.89 -0.3 923,845 - DvMF_0770 0.47 -0.1 923,974 + DvMF_0770 0.74 -0.1 924,197 + -0.8 924,237 + -0.0 924,307 + -0.5 924,342 + DvMF_0771 0.11 +0.0
Or see this region's nucleotide sequence