Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0767 and DvMF_0768 are separated by 226 nucleotides DvMF_0768 and DvMF_0769 are separated by 136 nucleotides DvMF_0769 and DvMF_0770 overlap by 4 nucleotides
DvMF_0767: DvMF_0767 - integrase family protein (RefSeq), at 920,234 to 921,349
_0767
DvMF_0768: DvMF_0768 - response regulator receiver modulated diguanylate cyclase (RefSeq), at 921,576 to 922,637
_0768
DvMF_0769: DvMF_0769 - metal dependent phosphohydrolase (RefSeq), at 922,774 to 923,613
_0769
DvMF_0770: DvMF_0770 - hypothetical protein (RefSeq), at 923,610 to 924,104
_0770
Position (kb) 921
922
923 Strain fitness (log2 ratio) -1
0
1
2 at 920.604 kb on + strand, within DvMF_0767 at 920.981 kb on - strand, within DvMF_0767 at 921.453 kb on - strand at 921.649 kb on - strand at 921.707 kb on - strand, within DvMF_0768 at 921.746 kb on - strand, within DvMF_0768 at 922.034 kb on - strand, within DvMF_0768 at 922.291 kb on - strand, within DvMF_0768 at 922.394 kb on - strand, within DvMF_0768 at 922.572 kb on + strand at 923.258 kb on + strand, within DvMF_0769 at 923.519 kb on - strand, within DvMF_0769
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 920,604 + DvMF_0767 0.33 -1.5 920,981 - DvMF_0767 0.67 -1.5 921,453 - -0.5 921,649 - +0.1 921,707 - DvMF_0768 0.12 +2.2 921,746 - DvMF_0768 0.16 -0.6 922,034 - DvMF_0768 0.43 +0.2 922,291 - DvMF_0768 0.67 -0.4 922,394 - DvMF_0768 0.77 -0.4 922,572 + +0.2 923,258 + DvMF_0769 0.58 +1.3 923,519 - DvMF_0769 0.89 -0.3
Or see this region's nucleotide sequence