Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0701 and DvMF_0702 are separated by 245 nucleotides DvMF_0702 and DvMF_0703 are separated by 32 nucleotides DvMF_0703 and DvMF_0704 are separated by 2 nucleotides
DvMF_0701: DvMF_0701 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 849,817 to 851,454
_0701
DvMF_0702: DvMF_0702 - hypothetical protein (RefSeq), at 851,700 to 852,092
_0702
DvMF_0703: DvMF_0703 - protein of unknown function DUF81 (RefSeq), at 852,125 to 853,063
_0703
DvMF_0704: DvMF_0704 - hypothetical protein (RefSeq), at 853,066 to 853,830
_0704
Position (kb) 851
852
853 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 850.720 kb on + strand, within DvMF_0701 at 850.875 kb on + strand, within DvMF_0701 at 850.917 kb on + strand, within DvMF_0701 at 851.120 kb on - strand, within DvMF_0701 at 851.694 kb on - strand at 851.962 kb on + strand, within DvMF_0702 at 852.006 kb on + strand, within DvMF_0702 at 852.142 kb on - strand at 852.193 kb on - strand at 852.214 kb on + strand at 852.341 kb on - strand, within DvMF_0703 at 852.686 kb on - strand, within DvMF_0703 at 852.757 kb on + strand, within DvMF_0703 at 852.795 kb on + strand, within DvMF_0703 at 852.795 kb on + strand, within DvMF_0703 at 852.813 kb on - strand, within DvMF_0703 at 852.839 kb on + strand, within DvMF_0703
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 850,720 + DvMF_0701 0.55 -1.0 850,875 + DvMF_0701 0.65 -1.1 850,917 + DvMF_0701 0.67 +0.1 851,120 - DvMF_0701 0.80 -0.5 851,694 - -0.4 851,962 + DvMF_0702 0.67 -0.3 852,006 + DvMF_0702 0.78 +1.7 852,142 - +0.1 852,193 - -0.2 852,214 + -0.6 852,341 - DvMF_0703 0.23 -0.4 852,686 - DvMF_0703 0.60 -0.5 852,757 + DvMF_0703 0.67 -3.1 852,795 + DvMF_0703 0.71 -0.5 852,795 + DvMF_0703 0.71 -0.8 852,813 - DvMF_0703 0.73 -0.5 852,839 + DvMF_0703 0.76 -1.0
Or see this region's nucleotide sequence