Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0652 and DvMF_0653 are separated by 708 nucleotides DvMF_0653 and DvMF_0654 are separated by 2 nucleotides
DvMF_0652: DvMF_0652 - Agmatine deiminase (RefSeq), at 784,731 to 785,843
_0652
DvMF_0653: DvMF_0653 - N-carbamoylputrescine amidase (RefSeq), at 786,552 to 787,493
_0653
DvMF_0654: DvMF_0654 - Amidohydrolase 3 (RefSeq), at 787,496 to 789,118
_0654
Position (kb) 786
787
788 Strain fitness (log2 ratio) -1
0
1
2 at 785.564 kb on + strand, within DvMF_0652 at 785.569 kb on + strand, within DvMF_0652 at 785.845 kb on + strand at 785.892 kb on - strand at 785.907 kb on + strand at 786.044 kb on + strand at 786.162 kb on + strand at 786.218 kb on - strand at 786.410 kb on - strand at 787.009 kb on + strand, within DvMF_0653 at 787.048 kb on - strand, within DvMF_0653 at 787.048 kb on - strand, within DvMF_0653 at 787.075 kb on + strand, within DvMF_0653 at 787.107 kb on - strand, within DvMF_0653 at 787.229 kb on + strand, within DvMF_0653 at 787.229 kb on + strand, within DvMF_0653 at 787.236 kb on + strand, within DvMF_0653 at 787.270 kb on - strand, within DvMF_0653 at 787.529 kb on + strand at 787.599 kb on + strand at 787.721 kb on + strand, within DvMF_0654 at 787.781 kb on + strand, within DvMF_0654 at 787.790 kb on - strand, within DvMF_0654 at 787.825 kb on - strand, within DvMF_0654 at 787.889 kb on + strand, within DvMF_0654 at 788.301 kb on + strand, within DvMF_0654 at 788.309 kb on - strand, within DvMF_0654 at 788.313 kb on + strand, within DvMF_0654 at 788.336 kb on - strand, within DvMF_0654 at 788.350 kb on - strand, within DvMF_0654 at 788.429 kb on - strand, within DvMF_0654 at 788.457 kb on - strand, within DvMF_0654
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 785,564 + DvMF_0652 0.75 -0.4 785,569 + DvMF_0652 0.75 +1.5 785,845 + -0.0 785,892 - -0.5 785,907 + -0.3 786,044 + +0.1 786,162 + +0.2 786,218 - -0.2 786,410 - -0.2 787,009 + DvMF_0653 0.49 -0.5 787,048 - DvMF_0653 0.53 -1.2 787,048 - DvMF_0653 0.53 -0.7 787,075 + DvMF_0653 0.56 -1.2 787,107 - DvMF_0653 0.59 -1.0 787,229 + DvMF_0653 0.72 -1.1 787,229 + DvMF_0653 0.72 -1.1 787,236 + DvMF_0653 0.73 -0.5 787,270 - DvMF_0653 0.76 -1.5 787,529 + -0.1 787,599 + -0.3 787,721 + DvMF_0654 0.14 -0.3 787,781 + DvMF_0654 0.18 +0.4 787,790 - DvMF_0654 0.18 -0.5 787,825 - DvMF_0654 0.20 +2.0 787,889 + DvMF_0654 0.24 -0.4 788,301 + DvMF_0654 0.50 -0.3 788,309 - DvMF_0654 0.50 -0.5 788,313 + DvMF_0654 0.50 -0.1 788,336 - DvMF_0654 0.52 -0.4 788,350 - DvMF_0654 0.53 -0.3 788,429 - DvMF_0654 0.57 -0.1 788,457 - DvMF_0654 0.59 -0.1
Or see this region's nucleotide sequence