Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0619

Experiment: Defined MoLS4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0619 and DvMF_0620 overlap by 4 nucleotidesDvMF_0620 and DvMF_0621 are separated by 294 nucleotides DvMF_0619: DvMF_0619 - CheA signal transduction histidine kinase (RefSeq), at 738,048 to 740,432 _0619 DvMF_0620: DvMF_0620 - CheW protein (RefSeq), at 740,429 to 741,067 _0620 DvMF_0621: DvMF_0621 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 741,362 to 743,545 _0621 Position (kb) 738 739 740 741Strain fitness (log2 ratio) -1 0 1at 737.877 kb on + strandat 738.231 kb on - strandat 738.242 kb on + strandat 738.273 kb on - strandat 738.300 kb on + strand, within DvMF_0619at 738.326 kb on - strand, within DvMF_0619at 738.492 kb on + strand, within DvMF_0619at 738.545 kb on - strand, within DvMF_0619at 738.633 kb on + strand, within DvMF_0619at 738.948 kb on - strand, within DvMF_0619at 739.160 kb on - strand, within DvMF_0619at 739.396 kb on - strand, within DvMF_0619at 739.560 kb on + strand, within DvMF_0619at 739.748 kb on - strand, within DvMF_0619at 739.774 kb on + strand, within DvMF_0619at 739.914 kb on + strand, within DvMF_0619at 740.053 kb on - strand, within DvMF_0619at 740.573 kb on - strand, within DvMF_0620at 740.865 kb on + strand, within DvMF_0620at 741.072 kb on - strandat 741.175 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Defined MoLS4
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737,877 + -0.4
738,231 - +0.1
738,242 + -0.0
738,273 - -0.2
738,300 + DvMF_0619 0.11 +0.6
738,326 - DvMF_0619 0.12 +0.2
738,492 + DvMF_0619 0.19 +0.2
738,545 - DvMF_0619 0.21 +0.3
738,633 + DvMF_0619 0.25 -0.2
738,948 - DvMF_0619 0.38 +0.1
739,160 - DvMF_0619 0.47 +0.3
739,396 - DvMF_0619 0.57 +0.1
739,560 + DvMF_0619 0.63 -0.4
739,748 - DvMF_0619 0.71 +0.1
739,774 + DvMF_0619 0.72 +0.0
739,914 + DvMF_0619 0.78 -0.1
740,053 - DvMF_0619 0.84 +0.1
740,573 - DvMF_0620 0.23 -0.1
740,865 + DvMF_0620 0.68 -0.3
741,072 - -0.1
741,175 - +0.3

Or see this region's nucleotide sequence