Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0474 and DvMF_0475 are separated by 0 nucleotides DvMF_0475 and DvMF_0476 are separated by 217 nucleotides DvMF_0476 and DvMF_0477 are separated by 238 nucleotides
DvMF_0474: DvMF_0474 - acetyltransferase (RefSeq), at 556,483 to 556,950
_0474
DvMF_0475: DvMF_0475 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq), at 556,951 to 557,424
_0475
DvMF_0476: DvMF_0476 - vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13) <small>(from data)</small>, at 557,642 to 560,098
_0476
DvMF_0477: DvMF_0477 - putative RNA polymerase, sigma 70 family subunit (RefSeq), at 560,337 to 561,761
_0477
Position (kb) 557
558
559
560
561 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 556.659 kb on - strand, within DvMF_0474 at 556.737 kb on + strand, within DvMF_0474 at 556.832 kb on + strand, within DvMF_0474 at 556.882 kb on + strand, within DvMF_0474 at 557.110 kb on - strand, within DvMF_0475 at 557.145 kb on - strand, within DvMF_0475 at 557.815 kb on + strand at 558.014 kb on + strand, within DvMF_0476 at 558.189 kb on + strand, within DvMF_0476 at 558.417 kb on - strand, within DvMF_0476 at 558.577 kb on - strand, within DvMF_0476 at 558.595 kb on + strand, within DvMF_0476 at 558.959 kb on + strand, within DvMF_0476 at 559.427 kb on + strand, within DvMF_0476 at 559.505 kb on - strand, within DvMF_0476 at 559.773 kb on - strand, within DvMF_0476 at 559.773 kb on - strand, within DvMF_0476 at 559.857 kb on - strand at 560.004 kb on - strand at 560.275 kb on + strand at 560.375 kb on + strand at 560.729 kb on + strand, within DvMF_0477
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 556,659 - DvMF_0474 0.38 -2.3 556,737 + DvMF_0474 0.54 -3.0 556,832 + DvMF_0474 0.75 -2.9 556,882 + DvMF_0474 0.85 -2.1 557,110 - DvMF_0475 0.34 -0.4 557,145 - DvMF_0475 0.41 -0.9 557,815 + -2.1 558,014 + DvMF_0476 0.15 -0.6 558,189 + DvMF_0476 0.22 -2.6 558,417 - DvMF_0476 0.32 -1.2 558,577 - DvMF_0476 0.38 -2.1 558,595 + DvMF_0476 0.39 -1.7 558,959 + DvMF_0476 0.54 -1.9 559,427 + DvMF_0476 0.73 -3.0 559,505 - DvMF_0476 0.76 -1.8 559,773 - DvMF_0476 0.87 -1.6 559,773 - DvMF_0476 0.87 -1.6 559,857 - -1.2 560,004 - -1.2 560,275 + -0.4 560,375 + -1.1 560,729 + DvMF_0477 0.28 -2.0
Or see this region's nucleotide sequence