Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0458 and DvMF_0459 are separated by 1 nucleotides DvMF_0459 and DvMF_0460 are separated by 477 nucleotides DvMF_0460 and DvMF_0461 are separated by 122 nucleotides DvMF_0461 and DvMF_0462 are separated by 110 nucleotides
DvMF_0458: DvMF_0458 - ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq), at 536,831 to 539,281
_0458
DvMF_0459: DvMF_0459 - ATP-dependent Clp protease adaptor protein ClpS (RefSeq), at 539,283 to 539,585
_0459
DvMF_0460: DvMF_0460 - adenylate cyclase (RefSeq), at 540,063 to 540,740
_0460
DvMF_0461: DvMF_0461 - Camphor resistance CrcB protein (RefSeq), at 540,863 to 541,237
_0461
DvMF_0462: DvMF_0462 - protein of unknown function DUF190 (RefSeq), at 541,348 to 541,743
_0462
Position (kb) 540
541 Strain fitness (log2 ratio) -1
0
1 at 539.281 kb on + strand at 539.281 kb on + strand at 539.291 kb on + strand at 539.366 kb on + strand, within DvMF_0459 at 539.379 kb on - strand, within DvMF_0459 at 539.885 kb on + strand at 539.900 kb on - strand at 539.920 kb on + strand at 540.080 kb on + strand at 540.234 kb on + strand, within DvMF_0460 at 540.324 kb on + strand, within DvMF_0460 at 540.637 kb on + strand, within DvMF_0460 at 540.901 kb on + strand, within DvMF_0461 at 541.173 kb on - strand, within DvMF_0461 at 541.253 kb on + strand at 541.281 kb on - strand at 541.370 kb on + strand at 541.641 kb on - strand, within DvMF_0462 at 541.738 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 539,281 + -0.3 539,281 + -0.4 539,291 + +0.2 539,366 + DvMF_0459 0.27 +0.6 539,379 - DvMF_0459 0.32 -0.3 539,885 + -0.3 539,900 - -0.0 539,920 + -0.3 540,080 + +0.0 540,234 + DvMF_0460 0.25 +0.5 540,324 + DvMF_0460 0.38 +0.4 540,637 + DvMF_0460 0.85 +0.5 540,901 + DvMF_0461 0.10 -0.7 541,173 - DvMF_0461 0.83 -0.2 541,253 + -0.5 541,281 - +0.2 541,370 + -0.4 541,641 - DvMF_0462 0.74 -0.7 541,738 + -0.6
Or see this region's nucleotide sequence