Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0450 and DvMF_0451 are separated by 83 nucleotides DvMF_0451 and DvMF_0452 overlap by 4 nucleotides DvMF_0452 and DvMF_0453 overlap by 4 nucleotides
DvMF_0450: DvMF_0450 - 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) <small>(from data)</small>, at 527,519 to 528,298
_0450
DvMF_0451: DvMF_0451 - DNA ligase, NAD-dependent (RefSeq), at 528,382 to 530,808
_0451
DvMF_0452: DvMF_0452 - hypothetical protein (RefSeq), at 530,805 to 531,647
_0452
DvMF_0453: DvMF_0453 - TrkA-N domain protein (RefSeq), at 531,644 to 532,684
_0453
Position (kb) 528
529
530
531 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 527.653 kb on + strand, within DvMF_0450 at 527.781 kb on - strand, within DvMF_0450 at 527.913 kb on + strand, within DvMF_0450 at 528.225 kb on - strand at 528.549 kb on + strand at 528.632 kb on + strand, within DvMF_0451 at 530.818 kb on - strand at 530.851 kb on - strand at 530.915 kb on + strand, within DvMF_0452 at 531.074 kb on + strand, within DvMF_0452 at 531.203 kb on - strand, within DvMF_0452 at 531.445 kb on + strand, within DvMF_0452 at 531.458 kb on - strand, within DvMF_0452 at 531.732 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 527,653 + DvMF_0450 0.17 -2.3 527,781 - DvMF_0450 0.34 -2.6 527,913 + DvMF_0450 0.51 -2.2 528,225 - -3.4 528,549 + -0.2 528,632 + DvMF_0451 0.10 +0.2 530,818 - +0.5 530,851 - -0.6 530,915 + DvMF_0452 0.13 -0.2 531,074 + DvMF_0452 0.32 +0.0 531,203 - DvMF_0452 0.47 -0.5 531,445 + DvMF_0452 0.76 -0.2 531,458 - DvMF_0452 0.77 +0.4 531,732 + -1.5
Or see this region's nucleotide sequence