Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0358 and DvMF_0359 are separated by 44 nucleotides DvMF_0359 and DvMF_0360 are separated by 587 nucleotides
DvMF_0358: DvMF_0358 - CBS domain containing protein (RefSeq), at 418,298 to 421,531
_0358
DvMF_0359: DvMF_0359 - tyrosine recombinase XerD (RefSeq), at 421,576 to 422,448
_0359
DvMF_0360: DvMF_0360 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 423,036 to 424,775
_0360
Position (kb) 421
422
423 Strain fitness (log2 ratio) -1
0
1
2 at 420.647 kb on - strand, within DvMF_0358 at 420.704 kb on - strand, within DvMF_0358 at 420.751 kb on - strand, within DvMF_0358 at 420.772 kb on + strand, within DvMF_0358 at 420.791 kb on - strand, within DvMF_0358 at 420.808 kb on - strand, within DvMF_0358 at 420.923 kb on - strand, within DvMF_0358 at 420.961 kb on + strand, within DvMF_0358 at 421.223 kb on - strand at 421.223 kb on - strand at 421.252 kb on - strand at 421.352 kb on + strand at 421.436 kb on - strand at 421.472 kb on - strand at 421.582 kb on - strand at 421.591 kb on + strand at 421.632 kb on + strand at 421.706 kb on - strand, within DvMF_0359 at 421.809 kb on - strand, within DvMF_0359 at 421.939 kb on - strand, within DvMF_0359 at 422.016 kb on + strand, within DvMF_0359 at 422.096 kb on + strand, within DvMF_0359 at 422.099 kb on - strand, within DvMF_0359 at 422.101 kb on + strand, within DvMF_0359 at 422.336 kb on + strand, within DvMF_0359 at 422.783 kb on + strand at 423.044 kb on + strand at 423.109 kb on + strand at 423.117 kb on - strand at 423.408 kb on + strand, within DvMF_0360
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 420,647 - DvMF_0358 0.73 -0.6 420,704 - DvMF_0358 0.74 -1.1 420,751 - DvMF_0358 0.76 -0.4 420,772 + DvMF_0358 0.76 +0.0 420,791 - DvMF_0358 0.77 -0.5 420,808 - DvMF_0358 0.78 -0.2 420,923 - DvMF_0358 0.81 -0.2 420,961 + DvMF_0358 0.82 -0.7 421,223 - -0.2 421,223 - -0.8 421,252 - -0.6 421,352 + -0.2 421,436 - -0.5 421,472 - -0.8 421,582 - -0.1 421,591 + -0.3 421,632 + -0.0 421,706 - DvMF_0359 0.15 -0.8 421,809 - DvMF_0359 0.27 -1.6 421,939 - DvMF_0359 0.42 -1.0 422,016 + DvMF_0359 0.50 -0.6 422,096 + DvMF_0359 0.60 -1.0 422,099 - DvMF_0359 0.60 -0.9 422,101 + DvMF_0359 0.60 -1.5 422,336 + DvMF_0359 0.87 -1.1 422,783 + -0.3 423,044 + -0.2 423,109 + -0.2 423,117 - +0.8 423,408 + DvMF_0360 0.21 +2.2
Or see this region's nucleotide sequence