Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0334 and DvMF_0335 are separated by 339 nucleotides DvMF_0335 and DvMF_0336 are separated by 165 nucleotides DvMF_0336 and DvMF_0337 are separated by 833 nucleotides
DvMF_0334: DvMF_0334 - Glutamate--tRNA ligase (RefSeq), at 390,542 to 391,663
_0334
DvMF_0335: DvMF_0335 - hypothetical protein (RefSeq), at 392,003 to 392,395
_0335
DvMF_0336: DvMF_0336 - transcriptional regulator, TetR family (RefSeq), at 392,561 to 393,136
_0336
DvMF_0337: DvMF_0337 - phospholipid/glycerol acyltransferase (RefSeq), at 393,970 to 394,812
_0337
Position (kb) 392
393
394 Strain fitness (log2 ratio) -1
0
1 at 391.565 kb on - strand at 391.728 kb on + strand at 391.845 kb on + strand at 391.880 kb on - strand at 392.105 kb on + strand, within DvMF_0335 at 392.261 kb on + strand, within DvMF_0335 at 392.294 kb on + strand, within DvMF_0335 at 392.910 kb on + strand, within DvMF_0336 at 392.970 kb on - strand, within DvMF_0336 at 393.224 kb on - strand at 393.298 kb on + strand at 393.406 kb on + strand at 393.406 kb on + strand at 393.660 kb on + strand at 393.752 kb on + strand at 393.936 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 391,565 - -0.2 391,728 + +0.1 391,845 + -0.1 391,880 - -0.7 392,105 + DvMF_0335 0.26 -0.6 392,261 + DvMF_0335 0.66 -0.5 392,294 + DvMF_0335 0.74 -0.5 392,910 + DvMF_0336 0.61 +0.6 392,970 - DvMF_0336 0.71 -0.1 393,224 - -0.4 393,298 + -0.6 393,406 + +0.0 393,406 + -0.2 393,660 + -0.3 393,752 + +0.1 393,936 - -1.6
Or see this region's nucleotide sequence