Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0070 and DvMF_0071 are separated by 15 nucleotides DvMF_0071 and DvMF_0072 are separated by 428 nucleotides DvMF_0072 and DvMF_0073 are separated by 122 nucleotides
DvMF_0070: DvMF_0070 - Nitrate reductase gamma subunit (RefSeq), at 90,370 to 91,377
_0070
DvMF_0071: DvMF_0071 - hypothetical protein (RefSeq), at 91,393 to 91,938
_0071
DvMF_0072: DvMF_0072 - hypothetical protein (RefSeq), at 92,367 to 93,407
_0072
DvMF_0073: DvMF_0073 - protein of unknown function DUF45 (RefSeq), at 93,530 to 94,480
_0073
Position (kb)
92
93
94 Strain fitness (log2 ratio)
-1
0
1 at 92.110 kb on + strand at 92.450 kb on - strand at 92.729 kb on - strand, within DvMF_0072 at 92.736 kb on - strand, within DvMF_0072 at 92.955 kb on - strand, within DvMF_0072 at 93.078 kb on - strand, within DvMF_0072 at 93.490 kb on - strand at 93.604 kb on - strand at 93.622 kb on + strand at 93.630 kb on - strand, within DvMF_0073 at 93.768 kb on - strand, within DvMF_0073 at 93.803 kb on - strand, within DvMF_0073 at 94.045 kb on - strand, within DvMF_0073 at 94.050 kb on - strand, within DvMF_0073 at 94.128 kb on + strand, within DvMF_0073 at 94.293 kb on + strand, within DvMF_0073 at 94.337 kb on - strand, within DvMF_0073 at 94.347 kb on + strand, within DvMF_0073 at 94.351 kb on + strand, within DvMF_0073 at 94.361 kb on - strand, within DvMF_0073 at 94.386 kb on + strand at 94.394 kb on - strand at 94.394 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 92,110 + -0.5 92,450 - +0.3 92,729 - DvMF_0072 0.35 -0.0 92,736 - DvMF_0072 0.35 +0.4 92,955 - DvMF_0072 0.56 +0.3 93,078 - DvMF_0072 0.68 +0.1 93,490 - +0.2 93,604 - -0.5 93,622 + -0.5 93,630 - DvMF_0073 0.11 -0.4 93,768 - DvMF_0073 0.25 -0.7 93,803 - DvMF_0073 0.29 +0.2 94,045 - DvMF_0073 0.54 -0.2 94,050 - DvMF_0073 0.55 -0.5 94,128 + DvMF_0073 0.63 -0.2 94,293 + DvMF_0073 0.80 -0.1 94,337 - DvMF_0073 0.85 -0.7 94,347 + DvMF_0073 0.86 -0.2 94,351 + DvMF_0073 0.86 -1.0 94,361 - DvMF_0073 0.87 -0.7 94,386 + -0.8 94,394 - -0.8 94,394 - -0.4
Or see this region's nucleotide sequence