Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0014 and DvMF_0015 are separated by 7 nucleotides DvMF_0015 and DvMF_0016 overlap by 4 nucleotides DvMF_0016 and DvMF_0017 are separated by 71 nucleotides DvMF_0017 and DvMF_0018 are separated by 3 nucleotides
DvMF_0014: DvMF_0014 - hypothetical protein (RefSeq), at 18,759 to 21,203
_0014
DvMF_0015: DvMF_0015 - peptidase C26 (RefSeq), at 21,211 to 21,834
_0015
DvMF_0016: DvMF_0016 - transferase, putative (RefSeq), at 21,831 to 22,622
_0016
DvMF_0017: DvMF_0017 - Methyltransferase type 11 (RefSeq), at 22,694 to 23,458
_0017
DvMF_0018: DvMF_0018 - adenylylsulfate kinase (RefSeq), at 23,462 to 24,049
_0018
Position (kb)
21
22
23 Strain fitness (log2 ratio)
-2
-1
0
1 at 21.162 kb on + strand at 21.197 kb on - strand at 21.205 kb on - strand at 21.241 kb on - strand at 21.285 kb on - strand, within DvMF_0015 at 21.836 kb on - strand at 22.011 kb on - strand, within DvMF_0016 at 22.263 kb on + strand, within DvMF_0016 at 22.379 kb on + strand, within DvMF_0016 at 22.399 kb on - strand, within DvMF_0016 at 22.399 kb on - strand, within DvMF_0016 at 22.399 kb on - strand, within DvMF_0016 at 23.086 kb on + strand, within DvMF_0017 at 23.304 kb on + strand, within DvMF_0017 at 23.334 kb on + strand, within DvMF_0017 at 23.460 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 21,162 + -0.4 21,197 - -0.6 21,205 - -0.6 21,241 - -0.5 21,285 - DvMF_0015 0.12 +0.0 21,836 - -0.5 22,011 - DvMF_0016 0.23 -0.9 22,263 + DvMF_0016 0.55 -0.8 22,379 + DvMF_0016 0.69 -1.8 22,399 - DvMF_0016 0.72 -1.3 22,399 - DvMF_0016 0.72 -0.8 22,399 - DvMF_0016 0.72 -2.0 23,086 + DvMF_0017 0.51 -0.0 23,304 + DvMF_0017 0.80 -0.3 23,334 + DvMF_0017 0.84 -0.5 23,460 - +0.2
Or see this region's nucleotide sequence