Experiment: Cerium(III) chloride 0.000195313 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4072 and Pf6N2E2_4073 are separated by 93 nucleotides Pf6N2E2_4073 and Pf6N2E2_4074 are separated by 15 nucleotides
Pf6N2E2_4072 - Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1), at 4,747,491 to 4,748,324
_4072
Pf6N2E2_4073 - Phosphate transport system permease protein PstA (TC 3.A.1.7.1), at 4,748,418 to 4,750,088
_4073
Pf6N2E2_4074 - Phosphate transport system permease protein PstC (TC 3.A.1.7.1), at 4,750,104 to 4,752,395
_4074
Position (kb)
4748
4749
4750
4751 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4747.445 kb on - strand at 4747.456 kb on - strand at 4747.456 kb on - strand at 4747.588 kb on + strand, within Pf6N2E2_4072 at 4747.588 kb on + strand, within Pf6N2E2_4072 at 4747.589 kb on - strand, within Pf6N2E2_4072 at 4747.589 kb on - strand, within Pf6N2E2_4072 at 4747.589 kb on - strand, within Pf6N2E2_4072 at 4747.589 kb on - strand, within Pf6N2E2_4072 at 4747.589 kb on - strand, within Pf6N2E2_4072 at 4747.675 kb on + strand, within Pf6N2E2_4072 at 4747.675 kb on + strand, within Pf6N2E2_4072 at 4747.676 kb on - strand, within Pf6N2E2_4072 at 4747.676 kb on - strand, within Pf6N2E2_4072 at 4747.927 kb on + strand, within Pf6N2E2_4072 at 4747.927 kb on + strand, within Pf6N2E2_4072 at 4748.185 kb on + strand, within Pf6N2E2_4072 at 4748.206 kb on + strand, within Pf6N2E2_4072 at 4748.206 kb on + strand, within Pf6N2E2_4072 at 4748.207 kb on - strand, within Pf6N2E2_4072 at 4748.306 kb on + strand at 4748.307 kb on - strand at 4748.307 kb on - strand at 4748.307 kb on - strand at 4748.342 kb on - strand at 4748.342 kb on - strand at 4748.355 kb on + strand at 4748.355 kb on + strand at 4748.356 kb on - strand at 4748.392 kb on - strand at 4748.392 kb on - strand at 4748.392 kb on - strand at 4748.392 kb on - strand at 4748.392 kb on - strand at 4748.419 kb on + strand at 4748.419 kb on + strand at 4748.419 kb on + strand at 4748.420 kb on - strand at 4748.420 kb on - strand at 4748.420 kb on - strand at 4748.423 kb on + strand at 4748.423 kb on + strand at 4748.424 kb on - strand at 4748.437 kb on + strand at 4748.438 kb on - strand at 4748.438 kb on - strand at 4748.438 kb on - strand at 4748.438 kb on - strand at 4748.522 kb on - strand at 4748.522 kb on - strand at 4748.572 kb on + strand at 4748.572 kb on + strand at 4748.572 kb on + strand at 4748.572 kb on + strand at 4748.572 kb on + strand at 4748.573 kb on - strand at 4748.573 kb on - strand at 4748.573 kb on - strand at 4748.573 kb on - strand at 4748.573 kb on - strand at 4748.573 kb on - strand at 4748.573 kb on - strand at 4748.573 kb on - strand at 4748.573 kb on - strand at 4748.573 kb on - strand at 4748.577 kb on - strand at 4748.577 kb on - strand at 4748.577 kb on - strand at 4748.577 kb on - strand at 4748.577 kb on - strand at 4748.577 kb on - strand at 4748.618 kb on - strand, within Pf6N2E2_4073 at 4748.618 kb on - strand, within Pf6N2E2_4073 at 4748.624 kb on - strand, within Pf6N2E2_4073 at 4748.624 kb on - strand, within Pf6N2E2_4073 at 4748.667 kb on + strand, within Pf6N2E2_4073 at 4748.668 kb on - strand, within Pf6N2E2_4073 at 4748.977 kb on + strand, within Pf6N2E2_4073 at 4748.978 kb on - strand, within Pf6N2E2_4073 at 4748.978 kb on - strand, within Pf6N2E2_4073 at 4748.978 kb on - strand, within Pf6N2E2_4073 at 4749.008 kb on - strand, within Pf6N2E2_4073 at 4749.008 kb on - strand, within Pf6N2E2_4073 at 4749.095 kb on - strand, within Pf6N2E2_4073 at 4749.241 kb on + strand, within Pf6N2E2_4073 at 4749.242 kb on - strand, within Pf6N2E2_4073 at 4749.242 kb on - strand, within Pf6N2E2_4073 at 4749.283 kb on + strand, within Pf6N2E2_4073 at 4749.404 kb on - strand, within Pf6N2E2_4073 at 4749.582 kb on + strand, within Pf6N2E2_4073 at 4749.658 kb on + strand, within Pf6N2E2_4073 at 4749.665 kb on - strand, within Pf6N2E2_4073 at 4749.922 kb on + strand at 4749.923 kb on - strand at 4749.923 kb on - strand at 4749.923 kb on - strand at 4750.096 kb on + strand at 4750.096 kb on + strand at 4750.097 kb on - strand at 4750.097 kb on - strand at 4750.097 kb on - strand at 4750.097 kb on - strand at 4750.097 kb on - strand at 4750.097 kb on - strand at 4750.105 kb on + strand at 4750.106 kb on - strand at 4750.106 kb on - strand at 4750.118 kb on - strand at 4750.507 kb on + strand, within Pf6N2E2_4074 at 4750.507 kb on + strand, within Pf6N2E2_4074 at 4750.507 kb on + strand, within Pf6N2E2_4074 at 4750.508 kb on - strand, within Pf6N2E2_4074 at 4750.508 kb on - strand at 4750.508 kb on - strand, within Pf6N2E2_4074 at 4750.508 kb on - strand, within Pf6N2E2_4074 at 4750.508 kb on - strand, within Pf6N2E2_4074 at 4750.508 kb on - strand, within Pf6N2E2_4074 at 4750.508 kb on - strand, within Pf6N2E2_4074 at 4750.508 kb on - strand, within Pf6N2E2_4074 at 4750.636 kb on + strand, within Pf6N2E2_4074 at 4750.636 kb on + strand, within Pf6N2E2_4074 at 4750.648 kb on + strand, within Pf6N2E2_4074 at 4750.648 kb on + strand, within Pf6N2E2_4074 at 4750.649 kb on - strand, within Pf6N2E2_4074 at 4750.649 kb on - strand, within Pf6N2E2_4074 at 4750.649 kb on - strand, within Pf6N2E2_4074 at 4750.649 kb on - strand at 4750.649 kb on - strand, within Pf6N2E2_4074 at 4750.649 kb on - strand, within Pf6N2E2_4074 at 4750.649 kb on - strand, within Pf6N2E2_4074 at 4750.933 kb on + strand, within Pf6N2E2_4074 at 4750.934 kb on - strand, within Pf6N2E2_4074 at 4750.942 kb on + strand, within Pf6N2E2_4074 at 4750.942 kb on + strand, within Pf6N2E2_4074 at 4750.943 kb on - strand, within Pf6N2E2_4074 at 4750.943 kb on - strand, within Pf6N2E2_4074 at 4750.987 kb on + strand, within Pf6N2E2_4074 at 4750.988 kb on - strand, within Pf6N2E2_4074 at 4750.988 kb on - strand, within Pf6N2E2_4074 at 4751.077 kb on + strand, within Pf6N2E2_4074 at 4751.077 kb on + strand, within Pf6N2E2_4074 at 4751.077 kb on + strand, within Pf6N2E2_4074 at 4751.077 kb on + strand, within Pf6N2E2_4074 at 4751.077 kb on + strand, within Pf6N2E2_4074 at 4751.078 kb on - strand, within Pf6N2E2_4074 at 4751.078 kb on - strand, within Pf6N2E2_4074 at 4751.078 kb on - strand, within Pf6N2E2_4074 at 4751.078 kb on - strand, within Pf6N2E2_4074 at 4751.078 kb on - strand, within Pf6N2E2_4074 at 4751.078 kb on - strand, within Pf6N2E2_4074
Per-strain Table
Position Strand Gene LocusTag Fraction Cerium(III) chloride 0.000195313 M remove 4,747,445 - +0.3 4,747,456 - +1.0 4,747,456 - -0.1 4,747,588 + Pf6N2E2_4072 0.12 +0.4 4,747,588 + Pf6N2E2_4072 0.12 +0.2 4,747,589 - Pf6N2E2_4072 0.12 -0.8 4,747,589 - Pf6N2E2_4072 0.12 -0.6 4,747,589 - Pf6N2E2_4072 0.12 -0.3 4,747,589 - Pf6N2E2_4072 0.12 +0.2 4,747,589 - Pf6N2E2_4072 0.12 -0.0 4,747,675 + Pf6N2E2_4072 0.22 +0.8 4,747,675 + Pf6N2E2_4072 0.22 +0.1 4,747,676 - Pf6N2E2_4072 0.22 +0.1 4,747,676 - Pf6N2E2_4072 0.22 -1.2 4,747,927 + Pf6N2E2_4072 0.52 -2.1 4,747,927 + Pf6N2E2_4072 0.52 -0.4 4,748,185 + Pf6N2E2_4072 0.83 -0.8 4,748,206 + Pf6N2E2_4072 0.86 -0.2 4,748,206 + Pf6N2E2_4072 0.86 -0.7 4,748,207 - Pf6N2E2_4072 0.86 -0.5 4,748,306 + -0.1 4,748,307 - -0.2 4,748,307 - -0.8 4,748,307 - -0.3 4,748,342 - -0.5 4,748,342 - +0.1 4,748,355 + -0.4 4,748,355 + -0.5 4,748,356 - +0.3 4,748,392 - +0.1 4,748,392 - -0.1 4,748,392 - -0.4 4,748,392 - +0.3 4,748,392 - +0.1 4,748,419 + +0.1 4,748,419 + -0.2 4,748,419 + -1.0 4,748,420 - -0.6 4,748,420 - -2.1 4,748,420 - +0.5 4,748,423 + -1.1 4,748,423 + -0.2 4,748,424 - -0.7 4,748,437 + +1.3 4,748,438 - -1.8 4,748,438 - +0.5 4,748,438 - +0.3 4,748,438 - +3.1 4,748,522 - -1.2 4,748,522 - -0.0 4,748,572 + -0.3 4,748,572 + -1.5 4,748,572 + -0.4 4,748,572 + -0.8 4,748,572 + -1.3 4,748,573 - -0.3 4,748,573 - -0.4 4,748,573 - -2.1 4,748,573 - -1.1 4,748,573 - -0.4 4,748,573 - -0.6 4,748,573 - -0.1 4,748,573 - +0.4 4,748,573 - -0.2 4,748,573 - +0.3 4,748,577 - -1.4 4,748,577 - -2.0 4,748,577 - -0.8 4,748,577 - -0.4 4,748,577 - -1.0 4,748,577 - -0.5 4,748,618 - Pf6N2E2_4073 0.12 -0.5 4,748,618 - Pf6N2E2_4073 0.12 -1.2 4,748,624 - Pf6N2E2_4073 0.12 -2.1 4,748,624 - Pf6N2E2_4073 0.12 -1.7 4,748,667 + Pf6N2E2_4073 0.15 -1.8 4,748,668 - Pf6N2E2_4073 0.15 -0.0 4,748,977 + Pf6N2E2_4073 0.33 -2.1 4,748,978 - Pf6N2E2_4073 0.34 -0.6 4,748,978 - Pf6N2E2_4073 0.34 -0.4 4,748,978 - Pf6N2E2_4073 0.34 -0.3 4,749,008 - Pf6N2E2_4073 0.35 -0.7 4,749,008 - Pf6N2E2_4073 0.35 -2.5 4,749,095 - Pf6N2E2_4073 0.41 -0.4 4,749,241 + Pf6N2E2_4073 0.49 +1.1 4,749,242 - Pf6N2E2_4073 0.49 -0.1 4,749,242 - Pf6N2E2_4073 0.49 -0.4 4,749,283 + Pf6N2E2_4073 0.52 -0.2 4,749,404 - Pf6N2E2_4073 0.59 -0.7 4,749,582 + Pf6N2E2_4073 0.70 +0.8 4,749,658 + Pf6N2E2_4073 0.74 -1.1 4,749,665 - Pf6N2E2_4073 0.75 +0.6 4,749,922 + +0.0 4,749,923 - -0.9 4,749,923 - -0.5 4,749,923 - -0.8 4,750,096 + -0.5 4,750,096 + -0.7 4,750,097 - -1.2 4,750,097 - +2.6 4,750,097 - -0.3 4,750,097 - -0.8 4,750,097 - +0.0 4,750,097 - -0.6 4,750,105 + -0.9 4,750,106 - +1.7 4,750,106 - +0.3 4,750,118 - -0.9 4,750,507 + Pf6N2E2_4074 0.18 -1.1 4,750,507 + Pf6N2E2_4074 0.18 -0.6 4,750,507 + Pf6N2E2_4074 0.18 -1.1 4,750,508 - Pf6N2E2_4074 0.18 +0.6 4,750,508 - +2.6 4,750,508 - Pf6N2E2_4074 0.18 +0.4 4,750,508 - Pf6N2E2_4074 0.18 -0.3 4,750,508 - Pf6N2E2_4074 0.18 -1.5 4,750,508 - Pf6N2E2_4074 0.18 -0.9 4,750,508 - Pf6N2E2_4074 0.18 -0.7 4,750,508 - Pf6N2E2_4074 0.18 -0.4 4,750,636 + Pf6N2E2_4074 0.23 -2.6 4,750,636 + Pf6N2E2_4074 0.23 -1.9 4,750,648 + Pf6N2E2_4074 0.24 -0.8 4,750,648 + Pf6N2E2_4074 0.24 -0.6 4,750,649 - Pf6N2E2_4074 0.24 -0.2 4,750,649 - Pf6N2E2_4074 0.24 +0.2 4,750,649 - Pf6N2E2_4074 0.24 +0.5 4,750,649 - +2.6 4,750,649 - Pf6N2E2_4074 0.24 +0.1 4,750,649 - Pf6N2E2_4074 0.24 -1.7 4,750,649 - Pf6N2E2_4074 0.24 -0.4 4,750,933 + Pf6N2E2_4074 0.36 +0.6 4,750,934 - Pf6N2E2_4074 0.36 -1.6 4,750,942 + Pf6N2E2_4074 0.37 -1.2 4,750,942 + Pf6N2E2_4074 0.37 -0.2 4,750,943 - Pf6N2E2_4074 0.37 -0.0 4,750,943 - Pf6N2E2_4074 0.37 -1.1 4,750,987 + Pf6N2E2_4074 0.39 -1.2 4,750,988 - Pf6N2E2_4074 0.39 -0.5 4,750,988 - Pf6N2E2_4074 0.39 -1.2 4,751,077 + Pf6N2E2_4074 0.42 -1.0 4,751,077 + Pf6N2E2_4074 0.42 -1.9 4,751,077 + Pf6N2E2_4074 0.42 -0.8 4,751,077 + Pf6N2E2_4074 0.42 -1.1 4,751,077 + Pf6N2E2_4074 0.42 -0.1 4,751,078 - Pf6N2E2_4074 0.42 -1.8 4,751,078 - Pf6N2E2_4074 0.42 +0.1 4,751,078 - Pf6N2E2_4074 0.42 -0.6 4,751,078 - Pf6N2E2_4074 0.42 -2.1 4,751,078 - Pf6N2E2_4074 0.42 -0.7 4,751,078 - Pf6N2E2_4074 0.42 -1.4
Or see this region's nucleotide sequence