Experiment: Cerium(III) chloride 0.000195313 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1804 and Pf6N2E2_1805 are separated by 49 nucleotides Pf6N2E2_1805 and Pf6N2E2_1806 are separated by 701 nucleotides
Pf6N2E2_1804 - Immune-responsive protein 1, at 2,133,440 to 2,134,834
_1804
Pf6N2E2_1805 - Multidrug resistance protein B, at 2,134,884 to 2,136,029
_1805
Pf6N2E2_1806 - hypothetical protein, at 2,136,731 to 2,137,237
_1806
Position (kb)
2134
2135
2136
2137 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2134.345 kb on - strand, within Pf6N2E2_1804 at 2134.424 kb on + strand, within Pf6N2E2_1804 at 2134.425 kb on - strand, within Pf6N2E2_1804 at 2134.620 kb on + strand, within Pf6N2E2_1804 at 2134.620 kb on + strand, within Pf6N2E2_1804 at 2134.620 kb on + strand, within Pf6N2E2_1804 at 2134.620 kb on + strand, within Pf6N2E2_1804 at 2134.621 kb on - strand, within Pf6N2E2_1804 at 2134.621 kb on - strand, within Pf6N2E2_1804 at 2134.723 kb on - strand at 2134.742 kb on - strand at 2134.742 kb on - strand at 2134.742 kb on - strand at 2134.842 kb on + strand at 2134.842 kb on + strand at 2134.843 kb on - strand at 2134.845 kb on - strand at 2134.956 kb on - strand at 2135.032 kb on - strand, within Pf6N2E2_1805 at 2135.032 kb on - strand, within Pf6N2E2_1805 at 2135.040 kb on + strand, within Pf6N2E2_1805 at 2135.535 kb on + strand, within Pf6N2E2_1805 at 2135.856 kb on + strand, within Pf6N2E2_1805 at 2135.856 kb on + strand, within Pf6N2E2_1805 at 2135.856 kb on + strand, within Pf6N2E2_1805 at 2135.928 kb on - strand at 2135.949 kb on + strand at 2135.950 kb on - strand at 2136.086 kb on + strand at 2136.087 kb on - strand at 2136.087 kb on - strand at 2136.122 kb on - strand at 2136.141 kb on + strand at 2136.141 kb on + strand at 2136.204 kb on - strand at 2136.204 kb on - strand at 2136.207 kb on + strand at 2136.207 kb on + strand at 2136.208 kb on - strand at 2136.208 kb on - strand at 2136.384 kb on + strand at 2136.385 kb on - strand at 2136.758 kb on + strand at 2136.921 kb on - strand, within Pf6N2E2_1806
Per-strain Table
Position Strand Gene LocusTag Fraction Cerium(III) chloride 0.000195313 M remove 2,134,345 - Pf6N2E2_1804 0.65 -0.3 2,134,424 + Pf6N2E2_1804 0.71 +0.7 2,134,425 - Pf6N2E2_1804 0.71 -0.5 2,134,620 + Pf6N2E2_1804 0.85 +0.1 2,134,620 + Pf6N2E2_1804 0.85 +0.4 2,134,620 + Pf6N2E2_1804 0.85 +0.6 2,134,620 + Pf6N2E2_1804 0.85 +0.5 2,134,621 - Pf6N2E2_1804 0.85 +0.0 2,134,621 - Pf6N2E2_1804 0.85 -0.7 2,134,723 - -0.1 2,134,742 - -1.7 2,134,742 - +0.1 2,134,742 - -0.9 2,134,842 + +2.7 2,134,842 + +0.5 2,134,843 - -0.4 2,134,845 - +0.5 2,134,956 - -0.3 2,135,032 - Pf6N2E2_1805 0.13 -0.8 2,135,032 - Pf6N2E2_1805 0.13 +0.0 2,135,040 + Pf6N2E2_1805 0.14 +0.3 2,135,535 + Pf6N2E2_1805 0.57 -1.3 2,135,856 + Pf6N2E2_1805 0.85 -1.2 2,135,856 + Pf6N2E2_1805 0.85 -0.6 2,135,856 + Pf6N2E2_1805 0.85 -1.9 2,135,928 - +0.1 2,135,949 + +0.2 2,135,950 - +0.1 2,136,086 + +0.7 2,136,087 - +0.1 2,136,087 - -0.6 2,136,122 - -0.1 2,136,141 + -0.4 2,136,141 + -0.2 2,136,204 - -0.6 2,136,204 - +0.1 2,136,207 + +0.1 2,136,207 + -0.4 2,136,208 - -3.0 2,136,208 - -0.8 2,136,384 + -0.3 2,136,385 - -0.2 2,136,758 + -0.3 2,136,921 - Pf6N2E2_1806 0.37 -0.1
Or see this region's nucleotide sequence