Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06580 and H281DRAFT_06581 are separated by 121 nucleotides H281DRAFT_06581 and H281DRAFT_06582 are separated by 111 nucleotides H281DRAFT_06582 and H281DRAFT_06583 are separated by 125 nucleotides
H281DRAFT_06580: H281DRAFT_06580 - DNA-binding transcriptional regulator, LysR family, at 21,711 to 22,622
_06580
H281DRAFT_06581: H281DRAFT_06581 - NADP-dependent 3-hydroxy acid dehydrogenase YdfG, at 22,744 to 23,475
_06581
H281DRAFT_06582: H281DRAFT_06582 - Predicted arabinose efflux permease, MFS family, at 23,587 to 24,831
_06582
H281DRAFT_06583: H281DRAFT_06583 - 2-haloacid dehalogenase, at 24,957 to 25,688
_06583
Position (kb) 23
24
25 Strain fitness (log2 ratio) -1
0
1
2 at 22.667 kb on - strand at 22.667 kb on - strand at 22.667 kb on - strand at 22.730 kb on - strand at 22.967 kb on + strand, within H281DRAFT_06581 at 23.359 kb on + strand, within H281DRAFT_06581 at 23.360 kb on - strand, within H281DRAFT_06581 at 23.820 kb on + strand, within H281DRAFT_06582 at 23.820 kb on + strand, within H281DRAFT_06582 at 23.821 kb on - strand, within H281DRAFT_06582 at 23.826 kb on - strand, within H281DRAFT_06582 at 23.955 kb on + strand, within H281DRAFT_06582 at 24.203 kb on - strand, within H281DRAFT_06582 at 24.218 kb on + strand, within H281DRAFT_06582 at 24.219 kb on - strand, within H281DRAFT_06582 at 24.250 kb on + strand, within H281DRAFT_06582 at 24.273 kb on + strand, within H281DRAFT_06582 at 24.274 kb on - strand, within H281DRAFT_06582 at 24.721 kb on + strand at 24.835 kb on + strand at 24.850 kb on + strand at 24.851 kb on - strand at 24.851 kb on - strand at 25.030 kb on - strand at 25.133 kb on + strand, within H281DRAFT_06583 at 25.134 kb on - strand, within H281DRAFT_06583 at 25.185 kb on + strand, within H281DRAFT_06583 at 25.461 kb on + strand, within H281DRAFT_06583 at 25.629 kb on + strand at 25.629 kb on + strand at 25.630 kb on - strand at 25.630 kb on - strand at 25.630 kb on - strand at 25.630 kb on - strand at 25.630 kb on - strand at 25.682 kb on + strand at 25.683 kb on - strand at 25.723 kb on - strand at 25.741 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 22,667 - +0.1 22,667 - +0.4 22,667 - +0.1 22,730 - +2.0 22,967 + H281DRAFT_06581 0.30 +2.0 23,359 + H281DRAFT_06581 0.84 +1.2 23,360 - H281DRAFT_06581 0.84 +0.0 23,820 + H281DRAFT_06582 0.19 +0.3 23,820 + H281DRAFT_06582 0.19 -0.1 23,821 - H281DRAFT_06582 0.19 +1.1 23,826 - H281DRAFT_06582 0.19 +0.6 23,955 + H281DRAFT_06582 0.30 +1.4 24,203 - H281DRAFT_06582 0.49 -0.0 24,218 + H281DRAFT_06582 0.51 +0.2 24,219 - H281DRAFT_06582 0.51 -1.0 24,250 + H281DRAFT_06582 0.53 -0.3 24,273 + H281DRAFT_06582 0.55 +0.9 24,274 - H281DRAFT_06582 0.55 +0.5 24,721 + -0.1 24,835 + +0.9 24,850 + +0.1 24,851 - -0.8 24,851 - +0.7 25,030 - -0.2 25,133 + H281DRAFT_06583 0.24 +0.0 25,134 - H281DRAFT_06583 0.24 +0.5 25,185 + H281DRAFT_06583 0.31 +0.3 25,461 + H281DRAFT_06583 0.69 +1.2 25,629 + -0.8 25,629 + +0.9 25,630 - -0.2 25,630 - -1.1 25,630 - +0.6 25,630 - +0.9 25,630 - -0.1 25,682 + +0.2 25,683 - -1.1 25,723 - -0.4 25,741 - +0.1
Or see this region's nucleotide sequence