Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06497 and H281DRAFT_06498 are separated by 99 nucleotides H281DRAFT_06498 and H281DRAFT_06499 overlap by 4 nucleotides H281DRAFT_06499 and H281DRAFT_06500 are separated by 131 nucleotides
H281DRAFT_06497: H281DRAFT_06497 - L-alanine-DL-glutamate epimerase, at 43,757 to 44,881
_06497
H281DRAFT_06498: H281DRAFT_06498 - Regulator of RNase E activity RraA, at 44,981 to 45,664
_06498
H281DRAFT_06499: H281DRAFT_06499 - D-3-phosphoglycerate dehydrogenase, at 45,661 to 46,581
_06499
H281DRAFT_06500: H281DRAFT_06500 - Lactate dehydrogenase, at 46,713 to 47,639
_06500
Position (kb) 45
46
47 Strain fitness (log2 ratio) -1
0
1
2 at 44.879 kb on + strand at 44.964 kb on - strand at 45.120 kb on - strand, within H281DRAFT_06498 at 45.746 kb on - strand at 45.903 kb on + strand, within H281DRAFT_06499 at 46.148 kb on + strand, within H281DRAFT_06499 at 46.148 kb on + strand, within H281DRAFT_06499 at 46.149 kb on - strand, within H281DRAFT_06499 at 46.209 kb on + strand, within H281DRAFT_06499 at 46.209 kb on + strand, within H281DRAFT_06499 at 46.233 kb on + strand, within H281DRAFT_06499 at 46.461 kb on + strand, within H281DRAFT_06499 at 46.461 kb on + strand, within H281DRAFT_06499 at 46.580 kb on - strand at 46.673 kb on - strand at 46.712 kb on + strand at 46.712 kb on + strand at 46.712 kb on + strand at 46.864 kb on - strand, within H281DRAFT_06500 at 47.510 kb on - strand, within H281DRAFT_06500 at 47.565 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 44,879 + -1.6 44,964 - +0.2 45,120 - H281DRAFT_06498 0.20 +0.3 45,746 - +0.1 45,903 + H281DRAFT_06499 0.26 -0.2 46,148 + H281DRAFT_06499 0.53 +1.2 46,148 + H281DRAFT_06499 0.53 +0.0 46,149 - H281DRAFT_06499 0.53 +0.8 46,209 + H281DRAFT_06499 0.60 +0.3 46,209 + H281DRAFT_06499 0.60 +0.9 46,233 + H281DRAFT_06499 0.62 +1.9 46,461 + H281DRAFT_06499 0.87 +0.7 46,461 + H281DRAFT_06499 0.87 +1.1 46,580 - -0.5 46,673 - -0.0 46,712 + +0.5 46,712 + +0.0 46,712 + +0.3 46,864 - H281DRAFT_06500 0.16 +0.7 47,510 - H281DRAFT_06500 0.86 +0.5 47,565 - +1.2
Or see this region's nucleotide sequence