Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06299 and H281DRAFT_06300 are separated by 38 nucleotides H281DRAFT_06300 and H281DRAFT_06301 overlap by 4 nucleotides H281DRAFT_06301 and H281DRAFT_06302 are separated by 209 nucleotides
H281DRAFT_06299: H281DRAFT_06299 - L-arabinose ABC transporter membrane protein, at 83,056 to 84,072
_06299
H281DRAFT_06300: H281DRAFT_06300 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 84,111 to 84,911
_06300
H281DRAFT_06301: H281DRAFT_06301 - L-arabinonolactonase (EC 3.1.1.15), at 84,908 to 85,831
_06301
H281DRAFT_06302: H281DRAFT_06302 - aldose 1-epimerase, at 86,041 to 87,111
_06302
Position (kb) 84
85
86 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 83.992 kb on + strand at 83.992 kb on + strand at 83.992 kb on + strand at 83.993 kb on - strand at 83.998 kb on + strand at 83.999 kb on - strand at 84.070 kb on + strand at 84.070 kb on + strand at 84.071 kb on - strand at 84.081 kb on + strand at 84.170 kb on + strand at 84.170 kb on + strand at 84.171 kb on - strand at 84.171 kb on - strand at 84.171 kb on - strand at 84.627 kb on + strand, within H281DRAFT_06300 at 84.627 kb on + strand, within H281DRAFT_06300 at 84.627 kb on + strand, within H281DRAFT_06300 at 84.628 kb on - strand, within H281DRAFT_06300 at 84.628 kb on - strand, within H281DRAFT_06300 at 84.628 kb on - strand, within H281DRAFT_06300 at 84.628 kb on - strand, within H281DRAFT_06300 at 85.064 kb on + strand, within H281DRAFT_06301 at 85.065 kb on - strand, within H281DRAFT_06301 at 85.145 kb on + strand, within H281DRAFT_06301 at 85.145 kb on + strand, within H281DRAFT_06301 at 85.145 kb on + strand, within H281DRAFT_06301 at 85.146 kb on - strand, within H281DRAFT_06301 at 85.146 kb on - strand, within H281DRAFT_06301 at 85.237 kb on + strand, within H281DRAFT_06301 at 85.427 kb on + strand, within H281DRAFT_06301 at 85.427 kb on + strand, within H281DRAFT_06301 at 85.427 kb on + strand, within H281DRAFT_06301 at 85.469 kb on + strand, within H281DRAFT_06301 at 85.644 kb on + strand, within H281DRAFT_06301 at 85.700 kb on + strand, within H281DRAFT_06301 at 85.701 kb on - strand, within H281DRAFT_06301 at 86.040 kb on + strand at 86.040 kb on + strand at 86.040 kb on + strand at 86.040 kb on + strand at 86.040 kb on + strand at 86.040 kb on + strand at 86.041 kb on - strand at 86.369 kb on - strand, within H281DRAFT_06302 at 86.399 kb on - strand, within H281DRAFT_06302 at 86.572 kb on + strand, within H281DRAFT_06302 at 86.572 kb on + strand, within H281DRAFT_06302 at 86.573 kb on - strand, within H281DRAFT_06302 at 86.573 kb on - strand, within H281DRAFT_06302 at 86.712 kb on - strand, within H281DRAFT_06302 at 86.712 kb on - strand, within H281DRAFT_06302 at 86.712 kb on - strand, within H281DRAFT_06302
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 83,992 + +0.1 83,992 + +0.7 83,992 + +0.9 83,993 - +0.7 83,998 + +1.8 83,999 - -0.1 84,070 + +0.6 84,070 + +0.6 84,071 - +0.0 84,081 + -1.1 84,170 + +0.4 84,170 + -0.1 84,171 - -0.6 84,171 - +0.1 84,171 - -1.3 84,627 + H281DRAFT_06300 0.64 +0.3 84,627 + H281DRAFT_06300 0.64 +0.3 84,627 + H281DRAFT_06300 0.64 +1.4 84,628 - H281DRAFT_06300 0.65 -0.8 84,628 - H281DRAFT_06300 0.65 -0.3 84,628 - H281DRAFT_06300 0.65 -0.5 84,628 - H281DRAFT_06300 0.65 -0.0 85,064 + H281DRAFT_06301 0.17 +0.6 85,065 - H281DRAFT_06301 0.17 +0.6 85,145 + H281DRAFT_06301 0.26 +0.8 85,145 + H281DRAFT_06301 0.26 -2.8 85,145 + H281DRAFT_06301 0.26 +0.2 85,146 - H281DRAFT_06301 0.26 -0.0 85,146 - H281DRAFT_06301 0.26 -0.4 85,237 + H281DRAFT_06301 0.36 +1.1 85,427 + H281DRAFT_06301 0.56 +1.0 85,427 + H281DRAFT_06301 0.56 +1.8 85,427 + H281DRAFT_06301 0.56 +0.8 85,469 + H281DRAFT_06301 0.61 +0.4 85,644 + H281DRAFT_06301 0.80 +0.6 85,700 + H281DRAFT_06301 0.86 -0.2 85,701 - H281DRAFT_06301 0.86 +1.2 86,040 + +0.8 86,040 + -0.5 86,040 + -0.8 86,040 + +0.3 86,040 + -0.8 86,040 + -0.5 86,041 - -1.2 86,369 - H281DRAFT_06302 0.31 -0.1 86,399 - H281DRAFT_06302 0.33 -1.8 86,572 + H281DRAFT_06302 0.50 -0.6 86,572 + H281DRAFT_06302 0.50 +0.1 86,573 - H281DRAFT_06302 0.50 +0.8 86,573 - H281DRAFT_06302 0.50 -0.9 86,712 - H281DRAFT_06302 0.63 +0.3 86,712 - H281DRAFT_06302 0.63 +0.0 86,712 - H281DRAFT_06302 0.63 -0.4
Or see this region's nucleotide sequence