Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06193 and H281DRAFT_06194 are separated by 80 nucleotides H281DRAFT_06194 and H281DRAFT_06195 are separated by 276 nucleotides H281DRAFT_06195 and H281DRAFT_06196 are separated by 33 nucleotides
H281DRAFT_06193: H281DRAFT_06193 - hypothetical protein, at 82,248 to 83,075
_06193
H281DRAFT_06194: H281DRAFT_06194 - Proteolipid membrane potential modulator, at 83,156 to 83,350
_06194
H281DRAFT_06195: H281DRAFT_06195 - hypothetical protein, at 83,627 to 83,890
_06195
H281DRAFT_06196: H281DRAFT_06196 - ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module, at 83,924 to 85,891
_06196
Position (kb) 83
84 Strain fitness (log2 ratio) -2
-1
0
1 at 82.708 kb on + strand, within H281DRAFT_06193 at 82.708 kb on + strand, within H281DRAFT_06193 at 82.708 kb on + strand, within H281DRAFT_06193 at 82.709 kb on - strand, within H281DRAFT_06193 at 82.709 kb on - strand, within H281DRAFT_06193 at 82.709 kb on - strand, within H281DRAFT_06193 at 82.754 kb on + strand, within H281DRAFT_06193 at 82.754 kb on + strand, within H281DRAFT_06193 at 82.754 kb on + strand, within H281DRAFT_06193 at 82.755 kb on - strand, within H281DRAFT_06193 at 82.755 kb on - strand, within H281DRAFT_06193 at 83.097 kb on + strand at 83.097 kb on + strand at 83.097 kb on + strand at 83.108 kb on + strand at 83.108 kb on + strand at 83.108 kb on + strand at 83.202 kb on + strand, within H281DRAFT_06194 at 83.211 kb on - strand, within H281DRAFT_06194 at 83.253 kb on - strand, within H281DRAFT_06194 at 83.342 kb on + strand at 83.343 kb on - strand at 83.354 kb on + strand at 83.377 kb on - strand at 83.407 kb on - strand at 83.409 kb on + strand at 83.409 kb on + strand at 83.409 kb on + strand at 83.523 kb on - strand at 83.523 kb on - strand at 83.591 kb on + strand at 83.592 kb on - strand at 83.598 kb on + strand at 83.804 kb on + strand, within H281DRAFT_06195 at 83.804 kb on + strand, within H281DRAFT_06195 at 83.805 kb on - strand, within H281DRAFT_06195 at 83.805 kb on - strand, within H281DRAFT_06195 at 83.805 kb on - strand, within H281DRAFT_06195 at 83.806 kb on + strand, within H281DRAFT_06195 at 83.807 kb on - strand, within H281DRAFT_06195 at 83.807 kb on - strand, within H281DRAFT_06195 at 83.860 kb on - strand, within H281DRAFT_06195 at 84.059 kb on + strand at 84.098 kb on - strand at 84.098 kb on - strand at 84.321 kb on + strand, within H281DRAFT_06196 at 84.322 kb on - strand, within H281DRAFT_06196 at 84.557 kb on + strand, within H281DRAFT_06196 at 84.557 kb on + strand, within H281DRAFT_06196 at 84.558 kb on - strand, within H281DRAFT_06196 at 84.678 kb on + strand, within H281DRAFT_06196 at 84.679 kb on - strand, within H281DRAFT_06196 at 84.686 kb on + strand, within H281DRAFT_06196 at 84.686 kb on + strand, within H281DRAFT_06196 at 84.686 kb on + strand, within H281DRAFT_06196 at 84.758 kb on + strand, within H281DRAFT_06196 at 84.759 kb on - strand, within H281DRAFT_06196 at 84.792 kb on - strand at 84.792 kb on - strand, within H281DRAFT_06196
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 82,708 + H281DRAFT_06193 0.56 +1.1 82,708 + H281DRAFT_06193 0.56 +1.3 82,708 + H281DRAFT_06193 0.56 -0.3 82,709 - H281DRAFT_06193 0.56 -0.7 82,709 - H281DRAFT_06193 0.56 +0.7 82,709 - H281DRAFT_06193 0.56 +0.5 82,754 + H281DRAFT_06193 0.61 +1.3 82,754 + H281DRAFT_06193 0.61 +0.6 82,754 + H281DRAFT_06193 0.61 +0.2 82,755 - H281DRAFT_06193 0.61 +0.1 82,755 - H281DRAFT_06193 0.61 -0.1 83,097 + -0.5 83,097 + +1.6 83,097 + -0.9 83,108 + -2.4 83,108 + -0.4 83,108 + +0.1 83,202 + H281DRAFT_06194 0.24 +0.7 83,211 - H281DRAFT_06194 0.28 +1.4 83,253 - H281DRAFT_06194 0.50 +0.5 83,342 + -0.2 83,343 - -0.2 83,354 + +0.3 83,377 - +0.3 83,407 - -1.1 83,409 + +0.2 83,409 + +0.4 83,409 + +0.1 83,523 - +1.2 83,523 - +0.3 83,591 + +0.2 83,592 - -0.9 83,598 + +0.1 83,804 + H281DRAFT_06195 0.67 -0.3 83,804 + H281DRAFT_06195 0.67 -0.7 83,805 - H281DRAFT_06195 0.67 +0.5 83,805 - H281DRAFT_06195 0.67 +0.0 83,805 - H281DRAFT_06195 0.67 -0.6 83,806 + H281DRAFT_06195 0.68 -1.6 83,807 - H281DRAFT_06195 0.68 +0.5 83,807 - H281DRAFT_06195 0.68 +0.3 83,860 - H281DRAFT_06195 0.88 -1.6 84,059 + -0.1 84,098 - +0.9 84,098 - +0.4 84,321 + H281DRAFT_06196 0.20 -0.2 84,322 - H281DRAFT_06196 0.20 -0.2 84,557 + H281DRAFT_06196 0.32 -0.0 84,557 + H281DRAFT_06196 0.32 -0.3 84,558 - H281DRAFT_06196 0.32 -0.7 84,678 + H281DRAFT_06196 0.38 -2.0 84,679 - H281DRAFT_06196 0.38 +1.2 84,686 + H281DRAFT_06196 0.39 +0.7 84,686 + H281DRAFT_06196 0.39 -0.2 84,686 + H281DRAFT_06196 0.39 -0.3 84,758 + H281DRAFT_06196 0.42 +1.0 84,759 - H281DRAFT_06196 0.42 -0.2 84,792 - -0.9 84,792 - H281DRAFT_06196 0.44 +1.0
Or see this region's nucleotide sequence