Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05863 and H281DRAFT_05864 are separated by 237 nucleotides H281DRAFT_05864 and H281DRAFT_05865 are separated by 114 nucleotides
H281DRAFT_05863: H281DRAFT_05863 - 3-oxoacyl-[acyl-carrier protein] reductase, at 628 to 1,395
_05863
H281DRAFT_05864: H281DRAFT_05864 - Pimeloyl-ACP methyl ester carboxylesterase, at 1,633 to 2,427
_05864
H281DRAFT_05865: H281DRAFT_05865 - transcriptional regulator, LysR family, at 2,542 to 3,450
_05865
Position (kb)
1
2
3 Strain fitness (log2 ratio)
-1
0
1 at 0.675 kb on - strand at 0.698 kb on + strand at 0.698 kb on + strand at 0.698 kb on + strand at 0.698 kb on + strand at 0.698 kb on + strand at 0.699 kb on - strand at 0.699 kb on - strand at 0.904 kb on + strand, within H281DRAFT_05863 at 0.905 kb on - strand, within H281DRAFT_05863 at 0.908 kb on + strand, within H281DRAFT_05863 at 0.925 kb on + strand, within H281DRAFT_05863 at 0.926 kb on - strand, within H281DRAFT_05863 at 1.055 kb on + strand, within H281DRAFT_05863 at 1.055 kb on + strand, within H281DRAFT_05863 at 1.452 kb on + strand at 1.497 kb on - strand at 1.651 kb on + strand at 1.652 kb on - strand at 1.860 kb on + strand, within H281DRAFT_05864 at 2.095 kb on + strand, within H281DRAFT_05864 at 2.182 kb on + strand, within H281DRAFT_05864 at 2.194 kb on + strand at 2.195 kb on - strand, within H281DRAFT_05864 at 2.291 kb on + strand, within H281DRAFT_05864 at 2.292 kb on - strand at 2.349 kb on - strand at 2.454 kb on - strand at 2.455 kb on + strand at 2.734 kb on + strand, within H281DRAFT_05865 at 2.734 kb on + strand, within H281DRAFT_05865 at 2.737 kb on + strand, within H281DRAFT_05865 at 2.737 kb on + strand, within H281DRAFT_05865 at 2.738 kb on - strand, within H281DRAFT_05865 at 2.749 kb on - strand, within H281DRAFT_05865 at 2.749 kb on - strand, within H281DRAFT_05865 at 2.916 kb on - strand, within H281DRAFT_05865 at 2.933 kb on - strand, within H281DRAFT_05865 at 3.323 kb on - strand, within H281DRAFT_05865 at 3.355 kb on + strand, within H281DRAFT_05865
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 675 - -0.1 698 + -0.3 698 + +0.4 698 + -0.4 698 + +1.3 698 + +0.4 699 - -0.1 699 - +1.2 904 + H281DRAFT_05863 0.36 +0.2 905 - H281DRAFT_05863 0.36 +0.0 908 + H281DRAFT_05863 0.36 +1.2 925 + H281DRAFT_05863 0.39 +0.5 926 - H281DRAFT_05863 0.39 -0.6 1,055 + H281DRAFT_05863 0.56 +0.2 1,055 + H281DRAFT_05863 0.56 +0.6 1,452 + +0.1 1,497 - +0.1 1,651 + -1.0 1,652 - +0.3 1,860 + H281DRAFT_05864 0.29 -0.0 2,095 + H281DRAFT_05864 0.58 +0.5 2,182 + H281DRAFT_05864 0.69 -0.4 2,194 + -0.2 2,195 - H281DRAFT_05864 0.71 +1.2 2,291 + H281DRAFT_05864 0.83 +1.7 2,292 - +1.6 2,349 - -0.3 2,454 - +0.2 2,455 + -0.7 2,734 + H281DRAFT_05865 0.21 +0.3 2,734 + H281DRAFT_05865 0.21 +0.6 2,737 + H281DRAFT_05865 0.21 -0.7 2,737 + H281DRAFT_05865 0.21 +0.9 2,738 - H281DRAFT_05865 0.22 +0.3 2,749 - H281DRAFT_05865 0.23 +0.1 2,749 - H281DRAFT_05865 0.23 +0.6 2,916 - H281DRAFT_05865 0.41 -0.3 2,933 - H281DRAFT_05865 0.43 +1.4 3,323 - H281DRAFT_05865 0.86 +0.1 3,355 + H281DRAFT_05865 0.89 +0.5
Or see this region's nucleotide sequence