Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04077

Experiment: Dodecandioic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04076 and H281DRAFT_04077 are separated by 165 nucleotidesH281DRAFT_04077 and H281DRAFT_04078 overlap by 1 nucleotidesH281DRAFT_04078 and H281DRAFT_04079 are separated by 141 nucleotides H281DRAFT_04076: H281DRAFT_04076 - FMN adenylyltransferase /riboflavin kinase, at 178,127 to 179,122 _04076 H281DRAFT_04077: H281DRAFT_04077 - Isoleucyl-tRNA synthetase, at 179,288 to 182,125 _04077 H281DRAFT_04078: H281DRAFT_04078 - signal peptidase II Aspartic peptidase. MEROPS family A08, at 182,125 to 182,643 _04078 H281DRAFT_04079: H281DRAFT_04079 - Phosphopantothenate-cysteine ligase /Phosphopantothenoylcysteine decarboxylase, at 182,785 to 183,999 _04079 Position (kb) 179 180 181 182 183Strain fitness (log2 ratio) -1 0 1at 179.116 kb on + strandat 179.116 kb on + strandat 179.116 kb on + strandat 179.264 kb on + strandat 182.606 kb on + strandat 182.606 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Dodecandioic (C)
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179,116 + -1.2
179,116 + +0.1
179,116 + +1.1
179,264 + -0.5
182,606 + -0.1
182,606 + -0.1

Or see this region's nucleotide sequence