Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03617 and H281DRAFT_03618 are separated by 50 nucleotides H281DRAFT_03618 and H281DRAFT_03619 are separated by 92 nucleotides H281DRAFT_03619 and H281DRAFT_03620 are separated by 152 nucleotides H281DRAFT_03620 and H281DRAFT_03621 are separated by 57 nucleotides
H281DRAFT_03617: H281DRAFT_03617 - hopene-associated glycosyltransferase HpnB, at 128,866 to 130,041
_03617
H281DRAFT_03618: H281DRAFT_03618 - hypothetical protein, at 130,092 to 130,652
_03618
H281DRAFT_03619: H281DRAFT_03619 - dihydroflavonol-4-reductase, at 130,745 to 131,755
_03619
H281DRAFT_03620: H281DRAFT_03620 - acylphosphatase, at 131,908 to 132,201
_03620
H281DRAFT_03621: H281DRAFT_03621 - dimethylhistidine N-methyltransferase, at 132,259 to 133,239
_03621
Position (kb) 130
131
132 Strain fitness (log2 ratio) -2
-1
0
1
2 at 129.748 kb on + strand, within H281DRAFT_03617 at 129.748 kb on + strand, within H281DRAFT_03617 at 129.748 kb on + strand, within H281DRAFT_03617 at 129.898 kb on + strand, within H281DRAFT_03617 at 129.898 kb on + strand, within H281DRAFT_03617 at 129.898 kb on + strand, within H281DRAFT_03617 at 129.898 kb on + strand, within H281DRAFT_03617 at 129.902 kb on - strand, within H281DRAFT_03617 at 130.039 kb on + strand at 130.103 kb on + strand at 130.103 kb on + strand at 130.103 kb on + strand at 130.104 kb on - strand at 130.104 kb on - strand at 130.104 kb on - strand at 130.104 kb on - strand at 130.112 kb on + strand at 130.113 kb on - strand at 130.113 kb on - strand at 130.113 kb on - strand at 130.114 kb on + strand at 130.114 kb on + strand at 130.668 kb on + strand at 130.669 kb on - strand at 130.669 kb on - strand at 130.703 kb on + strand at 130.704 kb on - strand at 130.759 kb on - strand at 130.858 kb on - strand, within H281DRAFT_03619 at 130.858 kb on - strand, within H281DRAFT_03619 at 130.858 kb on - strand, within H281DRAFT_03619 at 131.058 kb on + strand, within H281DRAFT_03619 at 131.058 kb on + strand, within H281DRAFT_03619 at 131.058 kb on + strand, within H281DRAFT_03619 at 131.224 kb on + strand, within H281DRAFT_03619 at 131.317 kb on - strand, within H281DRAFT_03619 at 131.538 kb on + strand, within H281DRAFT_03619 at 131.539 kb on - strand, within H281DRAFT_03619 at 131.585 kb on - strand, within H281DRAFT_03619 at 131.792 kb on + strand at 131.942 kb on - strand, within H281DRAFT_03620 at 131.945 kb on - strand, within H281DRAFT_03620 at 131.945 kb on - strand, within H281DRAFT_03620 at 132.146 kb on + strand, within H281DRAFT_03620 at 132.368 kb on + strand, within H281DRAFT_03621 at 132.369 kb on - strand, within H281DRAFT_03621 at 132.611 kb on + strand, within H281DRAFT_03621
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 129,748 + H281DRAFT_03617 0.75 -0.5 129,748 + H281DRAFT_03617 0.75 -0.5 129,748 + H281DRAFT_03617 0.75 +0.2 129,898 + H281DRAFT_03617 0.88 +0.3 129,898 + H281DRAFT_03617 0.88 -0.8 129,898 + H281DRAFT_03617 0.88 +0.2 129,898 + H281DRAFT_03617 0.88 +0.4 129,902 - H281DRAFT_03617 0.88 -0.8 130,039 + -2.0 130,103 + -0.6 130,103 + +0.1 130,103 + +0.2 130,104 - +0.6 130,104 - -2.4 130,104 - -0.4 130,104 - -0.3 130,112 + -0.3 130,113 - +0.7 130,113 - -0.3 130,113 - +0.2 130,114 + +2.3 130,114 + -0.5 130,668 + -0.2 130,669 - -0.7 130,669 - +0.4 130,703 + -1.6 130,704 - +0.8 130,759 - -0.2 130,858 - H281DRAFT_03619 0.11 +0.8 130,858 - H281DRAFT_03619 0.11 +1.9 130,858 - H281DRAFT_03619 0.11 +1.2 131,058 + H281DRAFT_03619 0.31 +0.4 131,058 + H281DRAFT_03619 0.31 +0.3 131,058 + H281DRAFT_03619 0.31 -0.0 131,224 + H281DRAFT_03619 0.47 +1.5 131,317 - H281DRAFT_03619 0.57 +1.5 131,538 + H281DRAFT_03619 0.78 +1.1 131,539 - H281DRAFT_03619 0.79 +1.6 131,585 - H281DRAFT_03619 0.83 +0.1 131,792 + -1.3 131,942 - H281DRAFT_03620 0.12 +1.4 131,945 - H281DRAFT_03620 0.13 +0.0 131,945 - H281DRAFT_03620 0.13 +0.1 132,146 + H281DRAFT_03620 0.81 +1.4 132,368 + H281DRAFT_03621 0.11 +0.1 132,369 - H281DRAFT_03621 0.11 +0.5 132,611 + H281DRAFT_03621 0.36 +2.0
Or see this region's nucleotide sequence