Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03202 and H281DRAFT_03203 are separated by 50 nucleotides H281DRAFT_03203 and H281DRAFT_03204 are separated by 26 nucleotides H281DRAFT_03204 and H281DRAFT_03205 are separated by 139 nucleotides H281DRAFT_03205 and H281DRAFT_03206 are separated by 73 nucleotides
H281DRAFT_03202: H281DRAFT_03202 - SnoaL-like domain-containing protein, at 251,629 to 251,997
_03202
H281DRAFT_03203: H281DRAFT_03203 - hypothetical protein, at 252,048 to 252,356
_03203
H281DRAFT_03204: H281DRAFT_03204 - L-fucose mutarotase, at 252,383 to 252,847
_03204
H281DRAFT_03205: H281DRAFT_03205 - putative oxidoreductase, at 252,987 to 253,418
_03205
H281DRAFT_03206: H281DRAFT_03206 - hypothetical protein, at 253,492 to 253,764
_03206
Position (kb) 252
253 Strain fitness (log2 ratio) -2
-1
0
1 at 251.418 kb on + strand at 251.418 kb on + strand at 251.439 kb on + strand at 251.439 kb on + strand at 251.440 kb on - strand at 251.477 kb on + strand at 251.513 kb on + strand at 251.513 kb on + strand at 251.525 kb on - strand at 251.543 kb on + strand at 252.021 kb on + strand at 252.022 kb on - strand at 252.163 kb on + strand, within H281DRAFT_03203 at 252.164 kb on - strand, within H281DRAFT_03203 at 252.321 kb on + strand, within H281DRAFT_03203 at 252.322 kb on - strand, within H281DRAFT_03203 at 252.322 kb on - strand, within H281DRAFT_03203 at 252.388 kb on + strand at 252.389 kb on - strand at 252.420 kb on + strand at 252.420 kb on + strand at 252.420 kb on + strand at 252.420 kb on + strand at 252.421 kb on - strand at 252.421 kb on - strand at 252.464 kb on - strand, within H281DRAFT_03204 at 252.589 kb on + strand, within H281DRAFT_03204 at 252.590 kb on - strand, within H281DRAFT_03204 at 252.640 kb on + strand, within H281DRAFT_03204 at 252.640 kb on + strand, within H281DRAFT_03204 at 252.641 kb on - strand, within H281DRAFT_03204 at 252.755 kb on + strand, within H281DRAFT_03204 at 252.755 kb on + strand, within H281DRAFT_03204 at 252.845 kb on + strand at 252.913 kb on + strand at 252.913 kb on + strand at 252.913 kb on + strand at 252.913 kb on + strand at 252.913 kb on + strand at 252.914 kb on - strand at 252.931 kb on - strand at 252.965 kb on + strand at 252.966 kb on - strand at 253.051 kb on + strand, within H281DRAFT_03205 at 253.052 kb on - strand, within H281DRAFT_03205 at 253.080 kb on + strand, within H281DRAFT_03205 at 253.184 kb on - strand, within H281DRAFT_03205 at 253.227 kb on + strand, within H281DRAFT_03205 at 253.227 kb on + strand, within H281DRAFT_03205 at 253.227 kb on + strand, within H281DRAFT_03205 at 253.227 kb on + strand, within H281DRAFT_03205 at 253.228 kb on - strand, within H281DRAFT_03205 at 253.228 kb on - strand, within H281DRAFT_03205 at 253.229 kb on + strand, within H281DRAFT_03205 at 253.229 kb on + strand, within H281DRAFT_03205 at 253.230 kb on - strand, within H281DRAFT_03205 at 253.464 kb on + strand at 253.488 kb on - strand at 253.492 kb on - strand at 253.492 kb on - strand at 253.492 kb on - strand at 253.492 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 251,418 + -2.4 251,418 + +0.1 251,439 + -0.0 251,439 + -0.5 251,440 - -0.2 251,477 + -0.2 251,513 + +0.2 251,513 + +1.0 251,525 - +0.3 251,543 + -1.1 252,021 + +0.1 252,022 - -0.2 252,163 + H281DRAFT_03203 0.37 +0.0 252,164 - H281DRAFT_03203 0.38 -1.2 252,321 + H281DRAFT_03203 0.88 +1.2 252,322 - H281DRAFT_03203 0.89 -0.5 252,322 - H281DRAFT_03203 0.89 +0.8 252,388 + -0.8 252,389 - -0.3 252,420 + +0.8 252,420 + +1.5 252,420 + +1.2 252,420 + -0.3 252,421 - +1.3 252,421 - -0.2 252,464 - H281DRAFT_03204 0.17 -0.2 252,589 + H281DRAFT_03204 0.44 -1.2 252,590 - H281DRAFT_03204 0.45 -0.2 252,640 + H281DRAFT_03204 0.55 -0.3 252,640 + H281DRAFT_03204 0.55 -1.4 252,641 - H281DRAFT_03204 0.55 -1.6 252,755 + H281DRAFT_03204 0.80 -2.7 252,755 + H281DRAFT_03204 0.80 +0.6 252,845 + +0.3 252,913 + -0.7 252,913 + +1.1 252,913 + +0.9 252,913 + -0.9 252,913 + -0.6 252,914 - +0.7 252,931 - -0.3 252,965 + -0.0 252,966 - -0.5 253,051 + H281DRAFT_03205 0.15 -0.5 253,052 - H281DRAFT_03205 0.15 +0.1 253,080 + H281DRAFT_03205 0.22 -0.2 253,184 - H281DRAFT_03205 0.46 -0.3 253,227 + H281DRAFT_03205 0.56 +0.4 253,227 + H281DRAFT_03205 0.56 +1.1 253,227 + H281DRAFT_03205 0.56 -1.0 253,227 + H281DRAFT_03205 0.56 +0.7 253,228 - H281DRAFT_03205 0.56 -0.9 253,228 - H281DRAFT_03205 0.56 -0.4 253,229 + H281DRAFT_03205 0.56 -0.2 253,229 + H281DRAFT_03205 0.56 -0.1 253,230 - H281DRAFT_03205 0.56 -0.2 253,464 + -0.1 253,488 - +0.2 253,492 - -0.2 253,492 - +0.4 253,492 - -0.1 253,492 - -0.5
Or see this region's nucleotide sequence