Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02483 and H281DRAFT_02484 are separated by 209 nucleotides H281DRAFT_02484 and H281DRAFT_02485 are separated by 74 nucleotides H281DRAFT_02485 and H281DRAFT_02486 are separated by 111 nucleotides
H281DRAFT_02483: H281DRAFT_02483 - transcriptional regulator, LysR family, at 56,262 to 57,179
_02483
H281DRAFT_02484: H281DRAFT_02484 - transcriptional regulator, GntR family, at 57,389 to 58,036
_02484
H281DRAFT_02485: H281DRAFT_02485 - gamma-glutamyltranspeptidase / glutathione hydrolase, at 58,111 to 59,775
_02485
H281DRAFT_02486: H281DRAFT_02486 - oxalate/formate antiporter, at 59,887 to 61,191
_02486
Position (kb) 58
59
60 Strain fitness (log2 ratio) -2
-1
0
1 at 57.176 kb on - strand at 57.176 kb on - strand at 57.252 kb on - strand at 57.490 kb on - strand, within H281DRAFT_02484 at 57.813 kb on + strand, within H281DRAFT_02484 at 57.840 kb on - strand, within H281DRAFT_02484 at 57.918 kb on + strand, within H281DRAFT_02484 at 57.918 kb on + strand, within H281DRAFT_02484 at 57.919 kb on - strand, within H281DRAFT_02484 at 58.005 kb on - strand at 58.326 kb on + strand, within H281DRAFT_02485 at 58.595 kb on - strand, within H281DRAFT_02485 at 58.927 kb on + strand, within H281DRAFT_02485 at 58.927 kb on + strand, within H281DRAFT_02485 at 59.273 kb on - strand, within H281DRAFT_02485 at 59.738 kb on - strand at 59.774 kb on - strand at 59.875 kb on - strand at 60.030 kb on - strand, within H281DRAFT_02486 at 60.086 kb on + strand, within H281DRAFT_02486 at 60.087 kb on - strand, within H281DRAFT_02486 at 60.250 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 57,176 - -1.9 57,176 - +0.1 57,252 - -0.5 57,490 - H281DRAFT_02484 0.16 +0.7 57,813 + H281DRAFT_02484 0.65 +0.2 57,840 - H281DRAFT_02484 0.70 -0.5 57,918 + H281DRAFT_02484 0.82 -0.7 57,918 + H281DRAFT_02484 0.82 -0.0 57,919 - H281DRAFT_02484 0.82 +0.0 58,005 - +0.0 58,326 + H281DRAFT_02485 0.13 +1.0 58,595 - H281DRAFT_02485 0.29 +1.6 58,927 + H281DRAFT_02485 0.49 +1.3 58,927 + H281DRAFT_02485 0.49 +0.1 59,273 - H281DRAFT_02485 0.70 +0.9 59,738 - -0.1 59,774 - +0.1 59,875 - -0.8 60,030 - H281DRAFT_02486 0.11 -0.1 60,086 + H281DRAFT_02486 0.15 -0.2 60,087 - H281DRAFT_02486 0.15 -0.3 60,250 + -0.0
Or see this region's nucleotide sequence