Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01716 and H281DRAFT_01717 are separated by 364 nucleotides H281DRAFT_01717 and H281DRAFT_01718 are separated by 157 nucleotides
H281DRAFT_01716: H281DRAFT_01716 - transcriptional regulator, LysR family, at 604,239 to 604,952
_01716
H281DRAFT_01717: H281DRAFT_01717 - L-alanine-DL-glutamate epimerase, at 605,317 to 606,483
_01717
H281DRAFT_01718: H281DRAFT_01718 - aerobic C4-dicarboxylate transport protein, at 606,641 to 607,999
_01718
Position (kb) 605
606
607 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 604.373 kb on - strand, within H281DRAFT_01716 at 604.375 kb on + strand, within H281DRAFT_01716 at 604.383 kb on + strand, within H281DRAFT_01716 at 604.384 kb on - strand, within H281DRAFT_01716 at 604.444 kb on + strand, within H281DRAFT_01716 at 604.445 kb on - strand, within H281DRAFT_01716 at 604.507 kb on - strand, within H281DRAFT_01716 at 604.575 kb on - strand, within H281DRAFT_01716 at 604.576 kb on + strand, within H281DRAFT_01716 at 604.577 kb on - strand, within H281DRAFT_01716 at 604.591 kb on + strand, within H281DRAFT_01716 at 604.636 kb on - strand, within H281DRAFT_01716 at 604.758 kb on + strand at 604.993 kb on + strand at 605.157 kb on - strand at 605.193 kb on - strand at 605.297 kb on - strand at 605.377 kb on + strand at 605.377 kb on + strand at 605.378 kb on - strand at 605.378 kb on - strand at 605.379 kb on + strand at 605.379 kb on + strand at 605.783 kb on - strand, within H281DRAFT_01717 at 605.830 kb on + strand, within H281DRAFT_01717 at 606.401 kb on - strand at 606.401 kb on - strand at 606.402 kb on + strand at 606.525 kb on + strand at 606.606 kb on - strand at 606.680 kb on + strand at 606.681 kb on - strand at 607.010 kb on + strand, within H281DRAFT_01718 at 607.011 kb on - strand, within H281DRAFT_01718 at 607.011 kb on - strand, within H281DRAFT_01718 at 607.012 kb on + strand at 607.013 kb on - strand, within H281DRAFT_01718 at 607.233 kb on - strand, within H281DRAFT_01718 at 607.335 kb on + strand, within H281DRAFT_01718 at 607.343 kb on - strand, within H281DRAFT_01718 at 607.375 kb on - strand, within H281DRAFT_01718 at 607.416 kb on - strand, within H281DRAFT_01718 at 607.467 kb on + strand, within H281DRAFT_01718
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 604,373 - H281DRAFT_01716 0.19 +0.2 604,375 + H281DRAFT_01716 0.19 -0.5 604,383 + H281DRAFT_01716 0.20 +0.6 604,384 - H281DRAFT_01716 0.20 +2.2 604,444 + H281DRAFT_01716 0.29 +0.0 604,445 - H281DRAFT_01716 0.29 -0.1 604,507 - H281DRAFT_01716 0.38 +0.4 604,575 - H281DRAFT_01716 0.47 -1.0 604,576 + H281DRAFT_01716 0.47 +0.5 604,577 - H281DRAFT_01716 0.47 -0.4 604,591 + H281DRAFT_01716 0.49 -0.1 604,636 - H281DRAFT_01716 0.56 -0.3 604,758 + +0.6 604,993 + -3.5 605,157 - +0.8 605,193 - -0.6 605,297 - -1.3 605,377 + +0.0 605,377 + -0.2 605,378 - -0.2 605,378 - -0.6 605,379 + +0.2 605,379 + -0.2 605,783 - H281DRAFT_01717 0.40 +0.9 605,830 + H281DRAFT_01717 0.44 +0.8 606,401 - -0.3 606,401 - +1.6 606,402 + -1.8 606,525 + -0.2 606,606 - +0.2 606,680 + +0.4 606,681 - -1.0 607,010 + H281DRAFT_01718 0.27 -0.1 607,011 - H281DRAFT_01718 0.27 +0.4 607,011 - H281DRAFT_01718 0.27 +0.2 607,012 + +1.8 607,013 - H281DRAFT_01718 0.27 -1.7 607,233 - H281DRAFT_01718 0.44 +0.1 607,335 + H281DRAFT_01718 0.51 -0.1 607,343 - H281DRAFT_01718 0.52 +0.1 607,375 - H281DRAFT_01718 0.54 -0.4 607,416 - H281DRAFT_01718 0.57 +0.4 607,467 + H281DRAFT_01718 0.61 -1.5
Or see this region's nucleotide sequence