Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01050 and H281DRAFT_01051 overlap by 4 nucleotides H281DRAFT_01051 and H281DRAFT_01052 are separated by 27 nucleotides H281DRAFT_01052 and H281DRAFT_01053 are separated by 34 nucleotides H281DRAFT_01053 and H281DRAFT_01054 are separated by 17 nucleotides
H281DRAFT_01050: H281DRAFT_01050 - maleylacetate reductase, at 1,180,503 to 1,181,597
_01050
H281DRAFT_01051: H281DRAFT_01051 - hydroxyquinol 1,2-dioxygenase, at 1,181,594 to 1,182,454
_01051
H281DRAFT_01052: H281DRAFT_01052 - hypothetical protein, at 1,182,482 to 1,182,766
_01052
H281DRAFT_01053: H281DRAFT_01053 - 3-hydroxyisobutyrate dehydrogenase, at 1,182,801 to 1,183,706
_01053
H281DRAFT_01054: H281DRAFT_01054 - (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase, at 1,183,724 to 1,184,794
_01054
Position (kb) 1182
1183 Strain fitness (log2 ratio) -2
-1
0
1 at 1182.706 kb on - strand, within H281DRAFT_01052 at 1182.760 kb on - strand at 1182.760 kb on - strand at 1182.766 kb on + strand at 1182.881 kb on - strand at 1183.412 kb on - strand, within H281DRAFT_01053 at 1183.594 kb on + strand, within H281DRAFT_01053
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 1,182,706 - H281DRAFT_01052 0.79 +0.9 1,182,760 - -0.6 1,182,760 - +0.5 1,182,766 + -1.3 1,182,881 - -1.6 1,183,412 - H281DRAFT_01053 0.67 +0.4 1,183,594 + H281DRAFT_01053 0.88 -2.3
Or see this region's nucleotide sequence