Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00855 and H281DRAFT_00856 are separated by 3 nucleotides H281DRAFT_00856 and H281DRAFT_00857 are separated by 135 nucleotides
H281DRAFT_00855: H281DRAFT_00855 - SSU ribosomal protein S12P methylthiotransferase, at 945,360 to 946,751
_00855
H281DRAFT_00856: H281DRAFT_00856 - 2-keto-3-deoxygluconate kinase, at 946,755 to 947,690
_00856
H281DRAFT_00857: H281DRAFT_00857 - acetyl-CoA acetyltransferase /3-ketoacyl-CoA thiolase, at 947,826 to 949,010
_00857
Position (kb) 946
947
948 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 946.119 kb on + strand, within H281DRAFT_00855 at 946.120 kb on - strand, within H281DRAFT_00855 at 946.681 kb on - strand at 946.681 kb on - strand at 946.846 kb on - strand at 947.031 kb on + strand, within H281DRAFT_00856 at 947.242 kb on + strand, within H281DRAFT_00856 at 947.454 kb on + strand, within H281DRAFT_00856 at 947.714 kb on + strand at 947.726 kb on + strand at 947.726 kb on + strand at 947.727 kb on - strand at 947.738 kb on + strand at 947.738 kb on + strand at 947.738 kb on + strand at 947.810 kb on - strand at 948.021 kb on + strand, within H281DRAFT_00857 at 948.021 kb on + strand, within H281DRAFT_00857 at 948.021 kb on + strand, within H281DRAFT_00857 at 948.021 kb on + strand, within H281DRAFT_00857 at 948.022 kb on - strand, within H281DRAFT_00857 at 948.022 kb on - strand, within H281DRAFT_00857 at 948.330 kb on + strand, within H281DRAFT_00857 at 948.408 kb on + strand, within H281DRAFT_00857 at 948.690 kb on + strand, within H281DRAFT_00857
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 946,119 + H281DRAFT_00855 0.55 -3.3 946,120 - H281DRAFT_00855 0.55 +1.6 946,681 - -2.0 946,681 - +0.4 946,846 - -0.2 947,031 + H281DRAFT_00856 0.29 -0.5 947,242 + H281DRAFT_00856 0.52 +1.2 947,454 + H281DRAFT_00856 0.75 +1.5 947,714 + -0.2 947,726 + +0.5 947,726 + -1.0 947,727 - -0.2 947,738 + -0.6 947,738 + -0.6 947,738 + -0.7 947,810 - +0.0 948,021 + H281DRAFT_00857 0.16 +0.3 948,021 + H281DRAFT_00857 0.16 -2.2 948,021 + H281DRAFT_00857 0.16 -0.7 948,021 + H281DRAFT_00857 0.16 +0.5 948,022 - H281DRAFT_00857 0.17 +0.8 948,022 - H281DRAFT_00857 0.17 +0.2 948,330 + H281DRAFT_00857 0.43 +0.5 948,408 + H281DRAFT_00857 0.49 -0.0 948,690 + H281DRAFT_00857 0.73 -0.4
Or see this region's nucleotide sequence