Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00489 and H281DRAFT_00490 are separated by 422 nucleotides H281DRAFT_00490 and H281DRAFT_00491 overlap by 8 nucleotides H281DRAFT_00491 and H281DRAFT_00492 are separated by 93 nucleotides
H281DRAFT_00489: H281DRAFT_00489 - hypothetical protein, at 547,791 to 548,975
_00489
H281DRAFT_00490: H281DRAFT_00490 - lipoprotein-releasing system permease protein, at 549,398 to 550,651
_00490
H281DRAFT_00491: H281DRAFT_00491 - lipoprotein-releasing system ATP-binding protein, at 550,644 to 551,387
_00491
H281DRAFT_00492: H281DRAFT_00492 - TatD DNase family protein, at 551,481 to 552,269
_00492
Position (kb) 549
550
551 Strain fitness (log2 ratio) -2
-1
0
1 at 548.701 kb on + strand, within H281DRAFT_00489 at 548.702 kb on - strand, within H281DRAFT_00489 at 548.882 kb on + strand at 548.945 kb on - strand at 549.154 kb on + strand at 549.155 kb on - strand at 549.155 kb on - strand at 549.155 kb on - strand at 549.155 kb on - strand at 551.385 kb on + strand at 551.447 kb on - strand at 551.447 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 548,701 + H281DRAFT_00489 0.77 +0.0 548,702 - H281DRAFT_00489 0.77 -0.1 548,882 + +0.8 548,945 - -0.2 549,154 + +0.9 549,155 - -1.5 549,155 - -1.8 549,155 - -0.4 549,155 - +0.0 551,385 + -1.9 551,447 - -0.6 551,447 - +0.8
Or see this region's nucleotide sequence