Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2291 and Ga0059261_2292 overlap by 29 nucleotides Ga0059261_2292 and Ga0059261_2293 are separated by 192 nucleotides Ga0059261_2293 and Ga0059261_2294 overlap by 4 nucleotides Ga0059261_2294 and Ga0059261_2295 overlap by 1 nucleotides
Ga0059261_2291: Ga0059261_2291 - putative efflux protein, MATE family, at 2,394,651 to 2,396,009
_2291
Ga0059261_2292: Ga0059261_2292 - zinc-ribbon domain/Protein of unknown function (DUF3426), at 2,395,981 to 2,396,679
_2292
Ga0059261_2293: Ga0059261_2293 - cell division ATP-binding protein FtsE, at 2,396,872 to 2,397,579
_2293
Ga0059261_2294: Ga0059261_2294 - Cell division protein, at 2,397,576 to 2,398,466
_2294
Ga0059261_2295: Ga0059261_2295 - DUF218 domain, at 2,398,466 to 2,399,014
_2295
Position (kb)
2396
2397
2398 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2395.972 kb on + strand at 2395.972 kb on + strand at 2395.982 kb on + strand at 2396.843 kb on + strand at 2396.843 kb on + strand at 2396.844 kb on - strand at 2396.844 kb on - strand at 2396.844 kb on - strand at 2396.846 kb on + strand at 2396.846 kb on + strand at 2396.846 kb on + strand at 2396.846 kb on + strand at 2396.846 kb on + strand at 2396.847 kb on - strand at 2396.847 kb on - strand at 2396.847 kb on - strand at 2396.847 kb on - strand at 2396.847 kb on - strand at 2396.847 kb on - strand at 2396.847 kb on - strand at 2396.880 kb on + strand at 2396.880 kb on + strand at 2396.880 kb on + strand at 2396.880 kb on + strand at 2396.880 kb on + strand at 2396.881 kb on - strand at 2396.971 kb on + strand, within Ga0059261_2293 at 2396.971 kb on + strand, within Ga0059261_2293 at 2396.971 kb on + strand, within Ga0059261_2293 at 2396.971 kb on + strand, within Ga0059261_2293 at 2396.971 kb on + strand, within Ga0059261_2293 at 2396.972 kb on - strand, within Ga0059261_2293 at 2396.972 kb on - strand, within Ga0059261_2293 at 2396.972 kb on - strand, within Ga0059261_2293 at 2397.025 kb on + strand, within Ga0059261_2293 at 2397.025 kb on + strand, within Ga0059261_2293 at 2397.025 kb on + strand, within Ga0059261_2293 at 2397.025 kb on + strand, within Ga0059261_2293 at 2397.025 kb on + strand, within Ga0059261_2293 at 2397.025 kb on + strand, within Ga0059261_2293 at 2397.025 kb on + strand, within Ga0059261_2293 at 2397.026 kb on - strand, within Ga0059261_2293 at 2397.026 kb on - strand, within Ga0059261_2293 at 2397.026 kb on - strand at 2397.026 kb on - strand, within Ga0059261_2293 at 2397.120 kb on + strand, within Ga0059261_2293 at 2397.169 kb on + strand, within Ga0059261_2293 at 2397.170 kb on - strand, within Ga0059261_2293 at 2397.219 kb on + strand, within Ga0059261_2293 at 2397.553 kb on + strand at 2397.633 kb on - strand at 2398.250 kb on + strand, within Ga0059261_2294 at 2398.251 kb on - strand, within Ga0059261_2294 at 2398.274 kb on + strand, within Ga0059261_2294
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,395,972 + -0.4 2,395,972 + +1.7 2,395,982 + -1.4 2,396,843 + +0.6 2,396,843 + -0.2 2,396,844 - -1.0 2,396,844 - -0.3 2,396,844 - +0.0 2,396,846 + -0.7 2,396,846 + +0.0 2,396,846 + +0.1 2,396,846 + +1.0 2,396,846 + -0.2 2,396,847 - -3.1 2,396,847 - -0.9 2,396,847 - +0.0 2,396,847 - +0.1 2,396,847 - -0.6 2,396,847 - -1.4 2,396,847 - -0.1 2,396,880 + -0.2 2,396,880 + +0.3 2,396,880 + -0.6 2,396,880 + -0.4 2,396,880 + -0.3 2,396,881 - -0.4 2,396,971 + Ga0059261_2293 0.14 +0.1 2,396,971 + Ga0059261_2293 0.14 +0.5 2,396,971 + Ga0059261_2293 0.14 -1.2 2,396,971 + Ga0059261_2293 0.14 -0.4 2,396,971 + Ga0059261_2293 0.14 +0.2 2,396,972 - Ga0059261_2293 0.14 -1.2 2,396,972 - Ga0059261_2293 0.14 +0.0 2,396,972 - Ga0059261_2293 0.14 +2.0 2,397,025 + Ga0059261_2293 0.22 -1.1 2,397,025 + Ga0059261_2293 0.22 +0.3 2,397,025 + Ga0059261_2293 0.22 -0.2 2,397,025 + Ga0059261_2293 0.22 +0.2 2,397,025 + Ga0059261_2293 0.22 +0.4 2,397,025 + Ga0059261_2293 0.22 -0.1 2,397,025 + Ga0059261_2293 0.22 +0.0 2,397,026 - Ga0059261_2293 0.22 +0.0 2,397,026 - Ga0059261_2293 0.22 -0.8 2,397,026 - -0.3 2,397,026 - Ga0059261_2293 0.22 -0.8 2,397,120 + Ga0059261_2293 0.35 -0.8 2,397,169 + Ga0059261_2293 0.42 -1.6 2,397,170 - Ga0059261_2293 0.42 +0.4 2,397,219 + Ga0059261_2293 0.49 -0.1 2,397,553 + -0.2 2,397,633 - -1.7 2,398,250 + Ga0059261_2294 0.76 +0.9 2,398,251 - Ga0059261_2294 0.76 +0.4 2,398,274 + Ga0059261_2294 0.78 +0.8
Or see this region's nucleotide sequence