Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02900

Experiment: PYE 4C survival rep3 58 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 4C survival rep3 58 days
3,052,202	+		CCNA_02899	0.44	-1.5
3,052,290	-		CCNA_02899	0.50	+0.2
3,052,295	-		CCNA_02899	0.50	-0.1
3,052,304	+		CCNA_02899	0.51	+1.5
3,052,357	-		CCNA_02899	0.54	-0.3
3,052,366	+		CCNA_02899	0.55	-1.0
3,052,375	+		CCNA_02899	0.55	-0.3
3,052,439	+		CCNA_02899	0.60	-1.3
3,052,470	-		CCNA_02899	0.62	-1.4
3,052,472	+		CCNA_02899	0.62	+0.4
3,052,477	+		CCNA_02899	0.62	-0.0
3,052,485	-		CCNA_02899	0.63	+0.1
3,052,495	-		CCNA_02899	0.63	+0.3
3,052,523	+		CCNA_02899	0.65	+2.0
3,052,590	+		CCNA_02899	0.70	-0.2
3,052,655	-		CCNA_02899	0.74	-0.9
3,052,661	+		CCNA_02899	0.74	+0.0
3,052,719	+		CCNA_02899	0.78	-1.5
3,052,719	+		CCNA_02899	0.78	+1.0
3,052,719	+		CCNA_02899	0.78	-2.0
3,052,793	-		CCNA_02899	0.83	+4.3
3,052,809	+		CCNA_02899	0.84	+1.1
3,052,809	+		CCNA_02899	0.84	-1.3
3,052,817	-		CCNA_02899	0.85	+2.2
3,052,817	-		CCNA_02899	0.85	+2.1
3,052,817	-		CCNA_02899	0.85	+0.1
3,052,824	-		CCNA_02899	0.85	-1.8
3,052,824	-		CCNA_02899	0.85	-0.2
3,052,824	-		CCNA_02899	0.85	-1.5
3,052,830	-		CCNA_02899	0.85	+0.9
3,052,841	+		CCNA_02899	0.86	-0.1
3,052,851	+		CCNA_02899	0.87	-0.9
3,052,868	+		CCNA_02899	0.88	+0.6
3,052,870	-		CCNA_02899	0.88	+0.3
3,052,933	+				+0.4
3,052,936	-				-0.2
3,052,944	+				-0.2
3,052,944	+				+0.8
3,052,952	-				-2.0
3,052,952	-				-0.5
3,053,008	+				+0.3
3,053,041	-				+2.2
3,053,079	-				+2.0
3,053,094	+				-0.2
3,053,102	-				-1.3
3,053,123	-				+0.0
3,053,124	+				-1.2
3,053,132	-				+0.3
3,053,142	+				-1.9
3,053,149	+				-0.8
3,053,186	+				-1.3
3,053,192	-				+1.3
3,053,202	-				-0.6
3,053,208	+				-0.3
3,053,216	-				+1.2
3,053,289	+				+0.2
3,053,290	-				-0.2
3,053,295	+				-1.9
3,053,297	-				+0.5
3,053,297	-				+0.9
3,053,303	-				+0.7
3,053,303	-				+2.1
3,053,313	-		CCNA_02900	0.11	+1.6
3,053,322	-		CCNA_02900	0.11	+0.3
3,053,357	-		CCNA_02900	0.14	-0.2
3,053,399	+		CCNA_02900	0.17	+0.2
3,053,399	+		CCNA_02900	0.17	-2.0
3,053,402	-		CCNA_02900	0.17	+1.0
3,053,407	-		CCNA_02900	0.18	+1.4
3,053,430	+		CCNA_02900	0.19	-1.0
3,053,430	+		CCNA_02900	0.19	-2.2
3,053,430	+		CCNA_02900	0.19	-1.4
3,053,430	+		CCNA_02900	0.19	-2.4
3,053,430	+		CCNA_02900	0.19	-1.0
3,053,438	+		CCNA_02900	0.20	+0.3
3,053,438	-		CCNA_02900	0.20	+0.7
3,053,446	-		CCNA_02900	0.21	+1.0
3,053,456	+		CCNA_02900	0.21	-3.4
3,053,464	-		CCNA_02900	0.22	+1.1
3,053,464	-		CCNA_02900	0.22	+0.0
3,053,543	-		CCNA_02900	0.28	+0.8
3,053,586	+		CCNA_02900	0.31	-0.5
3,053,591	+		CCNA_02900	0.32	-2.0
3,053,594	-		CCNA_02900	0.32	+1.2
3,053,627	+		CCNA_02900	0.34	+1.0
3,053,639	-		CCNA_02900	0.35	-1.8
3,053,677	-		CCNA_02900	0.38	-0.9
3,053,691	+		CCNA_02900	0.39	-0.3
3,053,708	+		CCNA_02900	0.41	+0.5
3,053,711	+		CCNA_02900	0.41	-3.2
3,053,720	+		CCNA_02900	0.42	+0.5
3,053,745	+				-0.5
3,053,752	+		CCNA_02900	0.44	-1.2
3,053,755	-		CCNA_02900	0.44	+0.1
3,053,758	+		CCNA_02900	0.44	-0.3
3,053,784	-		CCNA_02900	0.46	-0.3
3,053,800	+		CCNA_02900	0.48	-0.3
3,053,808	+		CCNA_02900	0.48	-0.6
3,053,812	+		CCNA_02900	0.49	-0.5
3,053,860	-		CCNA_02900	0.52	-0.7
3,053,880	-		CCNA_02900	0.54	+1.9
3,053,905	-		CCNA_02900	0.56	-0.2
3,053,913	+		CCNA_02900	0.56	+0.2
3,053,934	+		CCNA_02900	0.58	-0.8
3,053,973	+		CCNA_02900	0.61	-1.3
3,053,986	-		CCNA_02900	0.62	+0.7
3,054,017	-		CCNA_02900	0.64	+1.5
3,054,090	+		CCNA_02900	0.70	-2.5
3,054,132	+		CCNA_02900	0.73	-0.8
3,054,132	+		CCNA_02900	0.73	+0.5
3,054,132	+		CCNA_02900	0.73	-0.3
3,054,140	-		CCNA_02900	0.74	+1.0
3,054,140	-		CCNA_02900	0.74	+0.7
3,054,140	-		CCNA_02900	0.74	+0.6
3,054,140	-		CCNA_02900	0.74	+1.0
3,054,140	-		CCNA_02900	0.74	-0.1
3,054,140	-		CCNA_02900	0.74	+0.9
3,054,140	-		CCNA_02900	0.74	-0.5
3,054,150	-		CCNA_02900	0.74	+1.1
3,054,180	+		CCNA_02900	0.77	+0.5
3,054,180	+		CCNA_02900	0.77	-0.5
3,054,193	+		CCNA_02900	0.78	-2.9
3,054,193	-		CCNA_02900	0.78	+0.7
3,054,201	-		CCNA_02900	0.78	-0.7
3,054,218	-		CCNA_02900	0.79	+0.7
3,054,225	-		CCNA_02900	0.80	+0.7
3,054,270	+		CCNA_02900	0.83	+1.5
3,054,275	+		CCNA_02900	0.84	+1.1
3,054,275	+		CCNA_02900	0.84	-1.2
3,054,300	+		CCNA_02900	0.86	-0.3
3,054,310	+		CCNA_02900	0.86	-1.9
3,054,321	+		CCNA_02900	0.87	-1.0
3,054,329	-		CCNA_02900	0.88	-0.2
3,054,331	+		CCNA_02900	0.88	-1.1
3,054,333	+		CCNA_02900	0.88	+0.0
3,054,342	+		CCNA_02900	0.89	+2.2
3,054,342	+		CCNA_02900	0.89	-0.5
3,054,342	+		CCNA_02900	0.89	-0.2
3,054,342	+		CCNA_02900	0.89	-0.6
3,054,342	+		CCNA_02900	0.89	+2.1
3,054,342	+		CCNA_02900	0.89	-0.1
3,054,350	-		CCNA_02900	0.89	+1.0
3,054,350	-		CCNA_02900	0.89	+0.6
3,054,387	+				-3.3
3,054,405	-				+0.8
3,054,428	+				-2.4
3,054,468	-				+1.5
3,054,478	-				-2.4
3,054,501	-				+0.4
3,054,507	-				+2.0
3,054,521	+				+1.0
3,054,529	-				-2.7
3,054,563	-				-1.2
3,054,568	-				+3.9
3,054,598	+				+0.2
3,054,606	-				-0.0
3,054,606	-				-0.3
3,054,626	-				-1.8
3,054,656	+				+1.9
3,054,686	-				+1.0
3,054,693	+				+0.6
3,054,694	-				+0.3
3,054,745	-				+1.4
3,054,776	+				-2.4
3,054,788	-				+0.0
3,054,908	+		CCNA_02901	0.14	+0.5
3,054,908	+		CCNA_02901	0.14	-0.5
3,054,908	+		CCNA_02901	0.14	-3.0
3,054,911	-		CCNA_02901	0.14	-1.2
3,054,911	-		CCNA_02901	0.14	-0.3
3,054,916	-		CCNA_02901	0.15	-1.7
3,054,916	-		CCNA_02901	0.15	-0.9
3,054,916	-		CCNA_02901	0.15	-1.2
3,054,916	-		CCNA_02901	0.15	-0.3
3,054,927	+		CCNA_02901	0.15	+0.8
3,054,966	-		CCNA_02901	0.18	+0.2
3,054,966	-		CCNA_02901	0.18	+1.7
3,054,966	-		CCNA_02901	0.18	-0.6
3,054,974	-		CCNA_02901	0.18	-2.7
3,054,981	+		CCNA_02901	0.19	-2.2
3,054,981	+		CCNA_02901	0.19	+1.5
3,054,991	+		CCNA_02901	0.20	-0.5
3,055,001	-		CCNA_02901	0.20	-3.1
3,055,030	-		CCNA_02901	0.22	-1.2
3,055,046	+		CCNA_02901	0.23	-0.0
3,055,087	+		CCNA_02901	0.26	-0.8
3,055,104	+		CCNA_02901	0.27	+4.1
3,055,110	+		CCNA_02901	0.27	+0.2
3,055,110	+		CCNA_02901	0.27	-1.9
3,055,118	-		CCNA_02901	0.28	-0.2
3,055,123	-		CCNA_02901	0.28	-0.5
3,055,154	-		CCNA_02901	0.30	-2.7
3,055,157	+		CCNA_02901	0.31	-0.6
3,055,157	+		CCNA_02901	0.31	-2.6
3,055,184	-		CCNA_02901	0.32	+0.4
3,055,212	+		CCNA_02901	0.34	+2.5
3,055,239	+		CCNA_02901	0.36	-0.9
3,055,240	-		CCNA_02901	0.36	+1.3
3,055,268	-		CCNA_02901	0.38	+2.5
3,055,268	-		CCNA_02901	0.38	-0.5
3,055,270	+		CCNA_02901	0.38	-1.0
3,055,270	+		CCNA_02901	0.38	-0.8
3,055,367	+		CCNA_02901	0.44	-0.7
3,055,395	-		CCNA_02901	0.46	+0.7
3,055,447	-		CCNA_02901	0.50	-0.0
3,055,460	+		CCNA_02901	0.51	+0.4
3,055,460	+		CCNA_02901	0.51	-0.0
3,055,460	+		CCNA_02901	0.51	-0.0
3,055,460	+		CCNA_02901	0.51	+1.4
3,055,465	+		CCNA_02901	0.51	+0.5
3,055,467	+		CCNA_02901	0.51	-0.6
3,055,468	-		CCNA_02901	0.51	+1.8
3,055,468	-		CCNA_02901	0.51	+0.7
3,055,475	-		CCNA_02901	0.52	-0.3