Experiment: MoLS4 with L-Serine (N) without Molybdate/Tungstate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt sda and DVU2148 are separated by 474 nucleotides DVU2148 and DVU2149 are separated by 114 nucleotides
DVU2147: sda - L-serine dehydratase, putative (TIGR), at 2,244,026 to 2,245,534
sda
DVU2148: DVU2148 - CBS/transporter associated domain protein (TIGR), at 2,246,009 to 2,247,403
DVU2148
DVU2149: DVU2149 - conserved hypothetical protein (TIGR), at 2,247,518 to 2,249,257
DVU2149
Position (kb)
2246
2247
2248 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2245.037 kb on + strand, within sda at 2245.100 kb on - strand, within sda at 2245.124 kb on + strand, within sda at 2245.130 kb on + strand, within sda at 2245.130 kb on + strand, within sda at 2245.131 kb on - strand, within sda at 2245.132 kb on - strand, within sda at 2245.138 kb on - strand, within sda at 2245.236 kb on + strand, within sda at 2245.366 kb on + strand, within sda at 2245.476 kb on + strand at 2245.503 kb on - strand at 2245.536 kb on + strand at 2245.732 kb on - strand at 2245.963 kb on - strand at 2245.963 kb on - strand at 2245.965 kb on + strand at 2245.973 kb on - strand at 2245.980 kb on + strand at 2245.988 kb on - strand at 2246.057 kb on - strand at 2246.199 kb on - strand, within DVU2148 at 2246.209 kb on - strand, within DVU2148 at 2246.211 kb on + strand, within DVU2148 at 2246.211 kb on + strand, within DVU2148 at 2246.300 kb on - strand, within DVU2148 at 2246.349 kb on + strand, within DVU2148 at 2246.512 kb on - strand, within DVU2148 at 2246.531 kb on + strand, within DVU2148 at 2246.572 kb on + strand, within DVU2148 at 2246.824 kb on - strand, within DVU2148 at 2246.849 kb on - strand, within DVU2148 at 2246.908 kb on + strand, within DVU2148 at 2246.962 kb on + strand, within DVU2148 at 2247.038 kb on - strand, within DVU2148 at 2247.105 kb on + strand, within DVU2148 at 2247.128 kb on + strand, within DVU2148 at 2247.229 kb on + strand, within DVU2148 at 2247.294 kb on + strand at 2247.314 kb on + strand at 2247.344 kb on + strand at 2247.419 kb on + strand at 2247.515 kb on + strand at 2247.621 kb on - strand at 2247.712 kb on - strand, within DVU2149 at 2247.802 kb on + strand, within DVU2149 at 2247.886 kb on + strand, within DVU2149 at 2247.894 kb on - strand, within DVU2149 at 2247.953 kb on + strand, within DVU2149 at 2247.953 kb on - strand, within DVU2149 at 2247.953 kb on - strand, within DVU2149 at 2247.953 kb on - strand, within DVU2149 at 2247.974 kb on + strand, within DVU2149 at 2247.984 kb on - strand, within DVU2149 at 2248.072 kb on + strand, within DVU2149 at 2248.084 kb on - strand, within DVU2149 at 2248.100 kb on - strand, within DVU2149 at 2248.106 kb on - strand, within DVU2149 at 2248.158 kb on + strand, within DVU2149 at 2248.166 kb on - strand, within DVU2149 at 2248.166 kb on - strand, within DVU2149 at 2248.229 kb on - strand, within DVU2149 at 2248.229 kb on - strand, within DVU2149 at 2248.229 kb on - strand, within DVU2149 at 2248.252 kb on - strand, within DVU2149 at 2248.269 kb on + strand, within DVU2149 at 2248.277 kb on - strand, within DVU2149 at 2248.328 kb on - strand, within DVU2149 at 2248.390 kb on - strand, within DVU2149
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N) without Molybdate/Tungstate remove 2,245,037 + sda DVU2147 0.67 -1.5 2,245,100 - sda DVU2147 0.71 -1.7 2,245,124 + sda DVU2147 0.73 -3.1 2,245,130 + sda DVU2147 0.73 -2.0 2,245,130 + sda DVU2147 0.73 -2.7 2,245,131 - sda DVU2147 0.73 -2.5 2,245,132 - sda DVU2147 0.73 -2.7 2,245,138 - sda DVU2147 0.74 -2.6 2,245,236 + sda DVU2147 0.80 -1.5 2,245,366 + sda DVU2147 0.89 -3.9 2,245,476 + -3.3 2,245,503 - -2.8 2,245,536 + -2.5 2,245,732 - +1.2 2,245,963 - +2.4 2,245,963 - +3.0 2,245,965 + +1.8 2,245,973 - +2.5 2,245,980 + +1.5 2,245,988 - +2.1 2,246,057 - +1.8 2,246,199 - DVU2148 0.14 +2.4 2,246,209 - DVU2148 0.14 +1.6 2,246,211 + DVU2148 0.14 +1.8 2,246,211 + DVU2148 0.14 +0.5 2,246,300 - DVU2148 0.21 +3.7 2,246,349 + DVU2148 0.24 +1.6 2,246,512 - DVU2148 0.36 +1.7 2,246,531 + DVU2148 0.37 +0.2 2,246,572 + DVU2148 0.40 +0.3 2,246,824 - DVU2148 0.58 +1.3 2,246,849 - DVU2148 0.60 +1.2 2,246,908 + DVU2148 0.64 +0.6 2,246,962 + DVU2148 0.68 -0.1 2,247,038 - DVU2148 0.74 +0.4 2,247,105 + DVU2148 0.79 +0.8 2,247,128 + DVU2148 0.80 +0.3 2,247,229 + DVU2148 0.87 +0.0 2,247,294 + +0.6 2,247,314 + -0.4 2,247,344 + +0.4 2,247,419 + +0.0 2,247,515 + +0.7 2,247,621 - +0.3 2,247,712 - DVU2149 0.11 +0.0 2,247,802 + DVU2149 0.16 -0.0 2,247,886 + DVU2149 0.21 -0.5 2,247,894 - DVU2149 0.22 +1.6 2,247,953 + DVU2149 0.25 +0.1 2,247,953 - DVU2149 0.25 +0.1 2,247,953 - DVU2149 0.25 +0.1 2,247,953 - DVU2149 0.25 +0.2 2,247,974 + DVU2149 0.26 +0.6 2,247,984 - DVU2149 0.27 +0.7 2,248,072 + DVU2149 0.32 +0.8 2,248,084 - DVU2149 0.33 -0.4 2,248,100 - DVU2149 0.33 +0.4 2,248,106 - DVU2149 0.34 +0.4 2,248,158 + DVU2149 0.37 +0.3 2,248,166 - DVU2149 0.37 +0.4 2,248,166 - DVU2149 0.37 -0.0 2,248,229 - DVU2149 0.41 +0.1 2,248,229 - DVU2149 0.41 -0.8 2,248,229 - DVU2149 0.41 +0.6 2,248,252 - DVU2149 0.42 -0.6 2,248,269 + DVU2149 0.43 +0.1 2,248,277 - DVU2149 0.44 +0.2 2,248,328 - DVU2149 0.47 +0.1 2,248,390 - DVU2149 0.50 -0.2
Or see this region's nucleotide sequence