Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_723
Experiment: Cerium(III) chloride 0.000195313 M
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cerium(III) chloride 0.000195313 M |
---|---|---|---|---|---|
remove | |||||
825,986 | - | -0.4 | |||
825,986 | - | -0.7 | |||
826,288 | + | Pf6N2E2_722 | 0.30 | -0.7 | |
826,289 | - | Pf6N2E2_722 | 0.31 | -1.2 | |
826,375 | - | Pf6N2E2_722 | 0.40 | +0.0 | |
826,399 | + | Pf6N2E2_722 | 0.43 | +0.1 | |
826,399 | + | Pf6N2E2_722 | 0.43 | +0.5 | |
826,399 | + | Pf6N2E2_722 | 0.43 | +0.3 | |
826,400 | - | Pf6N2E2_722 | 0.43 | +1.5 | |
826,465 | + | Pf6N2E2_722 | 0.50 | +0.7 | |
826,465 | + | Pf6N2E2_722 | 0.50 | -0.3 | |
826,465 | + | Pf6N2E2_722 | 0.50 | -0.3 | |
826,466 | - | Pf6N2E2_722 | 0.50 | +0.4 | |
826,717 | - | Pf6N2E2_722 | 0.79 | +0.3 | |
826,717 | - | Pf6N2E2_722 | 0.79 | +0.3 | |
826,717 | - | Pf6N2E2_722 | 0.79 | +0.2 | |
826,717 | - | Pf6N2E2_722 | 0.79 | -0.7 | |
826,717 | - | Pf6N2E2_722 | 0.79 | -0.7 | |
826,886 | - | +0.5 | |||
826,886 | - | -1.2 | |||
827,102 | + | Pf6N2E2_723 | 0.43 | -0.7 | |
827,103 | - | Pf6N2E2_723 | 0.43 | -1.6 | |
827,310 | + | Pf6N2E2_723 | 0.87 | -0.4 | |
827,311 | - | Pf6N2E2_723 | 0.87 | +0.0 | |
827,401 | + | +0.6 | |||
827,401 | + | -0.3 | |||
827,402 | - | +0.6 | |||
827,402 | - | -1.1 | |||
827,604 | + | -0.1 | |||
827,604 | + | +0.3 | |||
827,613 | + | +0.1 | |||
827,613 | + | +0.9 | |||
827,613 | + | +0.1 | |||
827,614 | - | -1.7 | |||
828,193 | + | Pf6N2E2_724 | 0.53 | +0.2 | |
828,248 | - | Pf6N2E2_724 | 0.61 | +1.1 |
Or see this region's nucleotide sequence