Experiment: Cerium(III) chloride 0.000195313 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3441 and Pf6N2E2_3442 are separated by 139 nucleotides Pf6N2E2_3442 and Pf6N2E2_3443 are separated by 33 nucleotides Pf6N2E2_3443 and Pf6N2E2_3444 are separated by 82 nucleotides
Pf6N2E2_3441 - Gluconate transporter family protein, at 4,010,266 to 4,011,615
_3441
Pf6N2E2_3442 - hypothetical protein, at 4,011,755 to 4,011,916
_3442
Pf6N2E2_3443 - Sulfate permease, at 4,011,950 to 4,013,395
_3443
Pf6N2E2_3444 - FIG00963086: hypothetical protein, at 4,013,478 to 4,014,371
_3444
Position (kb)
4011
4012
4013
4014 Strain fitness (log2 ratio)
-1
0
1
2 at 4011.017 kb on + strand, within Pf6N2E2_3441 at 4011.065 kb on + strand, within Pf6N2E2_3441 at 4011.065 kb on + strand, within Pf6N2E2_3441 at 4011.447 kb on - strand, within Pf6N2E2_3441 at 4011.447 kb on - strand, within Pf6N2E2_3441 at 4011.447 kb on - strand, within Pf6N2E2_3441 at 4011.447 kb on - strand, within Pf6N2E2_3441 at 4011.620 kb on + strand at 4011.621 kb on - strand at 4011.621 kb on - strand at 4011.661 kb on + strand at 4011.701 kb on - strand at 4011.944 kb on + strand at 4011.944 kb on + strand at 4011.945 kb on - strand at 4011.945 kb on - strand at 4012.038 kb on + strand at 4012.039 kb on - strand at 4012.039 kb on - strand at 4012.190 kb on + strand, within Pf6N2E2_3443 at 4012.190 kb on + strand, within Pf6N2E2_3443 at 4012.191 kb on - strand, within Pf6N2E2_3443 at 4012.382 kb on + strand, within Pf6N2E2_3443 at 4012.382 kb on + strand, within Pf6N2E2_3443 at 4012.383 kb on - strand, within Pf6N2E2_3443 at 4012.383 kb on - strand, within Pf6N2E2_3443 at 4012.431 kb on + strand, within Pf6N2E2_3443 at 4012.497 kb on - strand, within Pf6N2E2_3443 at 4013.151 kb on - strand, within Pf6N2E2_3443 at 4013.306 kb on + strand at 4013.452 kb on + strand at 4013.453 kb on - strand at 4013.453 kb on - strand at 4013.453 kb on - strand at 4013.453 kb on - strand at 4013.587 kb on + strand, within Pf6N2E2_3444 at 4013.587 kb on + strand, within Pf6N2E2_3444 at 4013.587 kb on + strand, within Pf6N2E2_3444 at 4013.587 kb on + strand, within Pf6N2E2_3444 at 4013.588 kb on - strand, within Pf6N2E2_3444 at 4013.588 kb on - strand, within Pf6N2E2_3444 at 4013.588 kb on - strand, within Pf6N2E2_3444 at 4013.588 kb on - strand, within Pf6N2E2_3444 at 4013.588 kb on - strand, within Pf6N2E2_3444 at 4013.588 kb on - strand, within Pf6N2E2_3444 at 4013.588 kb on - strand, within Pf6N2E2_3444 at 4013.719 kb on + strand, within Pf6N2E2_3444 at 4013.719 kb on + strand, within Pf6N2E2_3444 at 4013.758 kb on + strand, within Pf6N2E2_3444 at 4013.758 kb on + strand, within Pf6N2E2_3444 at 4013.758 kb on + strand, within Pf6N2E2_3444 at 4013.759 kb on - strand, within Pf6N2E2_3444 at 4013.761 kb on - strand, within Pf6N2E2_3444 at 4013.837 kb on + strand, within Pf6N2E2_3444 at 4013.902 kb on + strand, within Pf6N2E2_3444 at 4013.902 kb on + strand, within Pf6N2E2_3444 at 4013.903 kb on - strand, within Pf6N2E2_3444 at 4013.903 kb on - strand, within Pf6N2E2_3444 at 4013.903 kb on - strand, within Pf6N2E2_3444 at 4014.022 kb on + strand, within Pf6N2E2_3444 at 4014.023 kb on - strand, within Pf6N2E2_3444 at 4014.023 kb on - strand, within Pf6N2E2_3444 at 4014.133 kb on - strand, within Pf6N2E2_3444 at 4014.363 kb on + strand at 4014.363 kb on + strand at 4014.363 kb on + strand at 4014.363 kb on + strand at 4014.364 kb on - strand at 4014.364 kb on - strand at 4014.364 kb on - strand at 4014.364 kb on - strand at 4014.364 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cerium(III) chloride 0.000195313 M remove 4,011,017 + Pf6N2E2_3441 0.56 -0.1 4,011,065 + Pf6N2E2_3441 0.59 +0.5 4,011,065 + Pf6N2E2_3441 0.59 -0.1 4,011,447 - Pf6N2E2_3441 0.87 +1.0 4,011,447 - Pf6N2E2_3441 0.87 +0.7 4,011,447 - Pf6N2E2_3441 0.87 +0.0 4,011,447 - Pf6N2E2_3441 0.87 -0.2 4,011,620 + -0.2 4,011,621 - +0.2 4,011,621 - +0.1 4,011,661 + +0.5 4,011,701 - -1.1 4,011,944 + +0.2 4,011,944 + -0.9 4,011,945 - -0.8 4,011,945 - +0.5 4,012,038 + -0.3 4,012,039 - -0.6 4,012,039 - +0.0 4,012,190 + Pf6N2E2_3443 0.17 +0.7 4,012,190 + Pf6N2E2_3443 0.17 +0.3 4,012,191 - Pf6N2E2_3443 0.17 -0.3 4,012,382 + Pf6N2E2_3443 0.30 +0.8 4,012,382 + Pf6N2E2_3443 0.30 +1.2 4,012,383 - Pf6N2E2_3443 0.30 -0.2 4,012,383 - Pf6N2E2_3443 0.30 +0.4 4,012,431 + Pf6N2E2_3443 0.33 +0.8 4,012,497 - Pf6N2E2_3443 0.38 +1.3 4,013,151 - Pf6N2E2_3443 0.83 -0.1 4,013,306 + +0.1 4,013,452 + -0.4 4,013,453 - -1.1 4,013,453 - -0.2 4,013,453 - -0.3 4,013,453 - +1.8 4,013,587 + Pf6N2E2_3444 0.12 -0.1 4,013,587 + Pf6N2E2_3444 0.12 -0.1 4,013,587 + Pf6N2E2_3444 0.12 +0.6 4,013,587 + Pf6N2E2_3444 0.12 +2.0 4,013,588 - Pf6N2E2_3444 0.12 +0.2 4,013,588 - Pf6N2E2_3444 0.12 +0.2 4,013,588 - Pf6N2E2_3444 0.12 +0.0 4,013,588 - Pf6N2E2_3444 0.12 -0.1 4,013,588 - Pf6N2E2_3444 0.12 -0.4 4,013,588 - Pf6N2E2_3444 0.12 +0.4 4,013,588 - Pf6N2E2_3444 0.12 +0.7 4,013,719 + Pf6N2E2_3444 0.27 +0.1 4,013,719 + Pf6N2E2_3444 0.27 +0.4 4,013,758 + Pf6N2E2_3444 0.31 +0.6 4,013,758 + Pf6N2E2_3444 0.31 -0.5 4,013,758 + Pf6N2E2_3444 0.31 +1.4 4,013,759 - Pf6N2E2_3444 0.31 +0.3 4,013,761 - Pf6N2E2_3444 0.32 -0.2 4,013,837 + Pf6N2E2_3444 0.40 +0.4 4,013,902 + Pf6N2E2_3444 0.47 +1.0 4,013,902 + Pf6N2E2_3444 0.47 -0.3 4,013,903 - Pf6N2E2_3444 0.48 +0.2 4,013,903 - Pf6N2E2_3444 0.48 -0.0 4,013,903 - Pf6N2E2_3444 0.48 +0.5 4,014,022 + Pf6N2E2_3444 0.61 -0.3 4,014,023 - Pf6N2E2_3444 0.61 +0.3 4,014,023 - Pf6N2E2_3444 0.61 -0.6 4,014,133 - Pf6N2E2_3444 0.73 +0.7 4,014,363 + +0.1 4,014,363 + +0.2 4,014,363 + +0.3 4,014,363 + +1.4 4,014,364 - -1.0 4,014,364 - +0.2 4,014,364 - +0.3 4,014,364 - -0.5 4,014,364 - +0.3
Or see this region's nucleotide sequence