Experiment: Cerium(III) chloride 0.000195313 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3410 and Pf6N2E2_3411 are separated by 28 nucleotides Pf6N2E2_3411 and Pf6N2E2_3412 are separated by 5 nucleotides Pf6N2E2_3412 and Pf6N2E2_3413 are separated by 22 nucleotides
Pf6N2E2_3410 - Short-chain dehydrogenase/reductase SDR, at 3,954,271 to 3,955,104
_3410
Pf6N2E2_3411 - hypothetical protein, at 3,955,133 to 3,955,258
_3411
Pf6N2E2_3412 - FIG006045: Sigma factor, ECF subfamily, at 3,955,264 to 3,955,818
_3412
Pf6N2E2_3413 - Fe2+-dicitrate sensor, membrane component, at 3,955,841 to 3,956,788
_3413
Position (kb)
3955
3956 Strain fitness (log2 ratio)
-1
0
1 at 3954.337 kb on - strand at 3954.500 kb on + strand, within Pf6N2E2_3410 at 3954.657 kb on - strand, within Pf6N2E2_3410 at 3954.657 kb on - strand, within Pf6N2E2_3410 at 3954.657 kb on - strand, within Pf6N2E2_3410 at 3954.657 kb on - strand, within Pf6N2E2_3410 at 3954.659 kb on + strand, within Pf6N2E2_3410 at 3954.659 kb on + strand, within Pf6N2E2_3410 at 3954.660 kb on - strand, within Pf6N2E2_3410 at 3954.660 kb on - strand, within Pf6N2E2_3410 at 3954.711 kb on + strand, within Pf6N2E2_3410 at 3954.711 kb on + strand, within Pf6N2E2_3410 at 3955.121 kb on + strand at 3955.121 kb on + strand at 3955.122 kb on - strand at 3955.138 kb on - strand at 3955.160 kb on + strand, within Pf6N2E2_3411 at 3955.161 kb on - strand, within Pf6N2E2_3411 at 3955.161 kb on - strand, within Pf6N2E2_3411 at 3955.161 kb on - strand, within Pf6N2E2_3411 at 3955.161 kb on - strand, within Pf6N2E2_3411 at 3955.187 kb on + strand, within Pf6N2E2_3411 at 3955.187 kb on + strand, within Pf6N2E2_3411 at 3955.188 kb on - strand, within Pf6N2E2_3411 at 3955.193 kb on + strand, within Pf6N2E2_3411 at 3955.193 kb on + strand, within Pf6N2E2_3411 at 3955.193 kb on + strand, within Pf6N2E2_3411 at 3955.193 kb on + strand, within Pf6N2E2_3411 at 3955.194 kb on - strand, within Pf6N2E2_3411 at 3955.490 kb on - strand, within Pf6N2E2_3412 at 3955.555 kb on + strand, within Pf6N2E2_3412 at 3955.555 kb on + strand, within Pf6N2E2_3412 at 3955.556 kb on - strand, within Pf6N2E2_3412 at 3955.640 kb on + strand, within Pf6N2E2_3412 at 3955.640 kb on + strand, within Pf6N2E2_3412 at 3955.641 kb on - strand, within Pf6N2E2_3412 at 3955.689 kb on - strand, within Pf6N2E2_3412 at 3955.724 kb on + strand, within Pf6N2E2_3412 at 3955.725 kb on - strand, within Pf6N2E2_3412 at 3955.752 kb on + strand, within Pf6N2E2_3412 at 3955.752 kb on + strand, within Pf6N2E2_3412 at 3955.752 kb on + strand, within Pf6N2E2_3412 at 3955.753 kb on - strand, within Pf6N2E2_3412 at 3955.792 kb on + strand at 3955.793 kb on - strand at 3955.817 kb on - strand at 3956.118 kb on - strand, within Pf6N2E2_3413 at 3956.234 kb on + strand, within Pf6N2E2_3413 at 3956.235 kb on - strand, within Pf6N2E2_3413 at 3956.235 kb on - strand, within Pf6N2E2_3413 at 3956.235 kb on - strand, within Pf6N2E2_3413 at 3956.235 kb on - strand, within Pf6N2E2_3413 at 3956.235 kb on - strand, within Pf6N2E2_3413 at 3956.235 kb on - strand, within Pf6N2E2_3413 at 3956.235 kb on - strand, within Pf6N2E2_3413 at 3956.235 kb on - strand, within Pf6N2E2_3413 at 3956.235 kb on - strand, within Pf6N2E2_3413 at 3956.355 kb on + strand, within Pf6N2E2_3413 at 3956.355 kb on + strand, within Pf6N2E2_3413 at 3956.547 kb on + strand, within Pf6N2E2_3413 at 3956.547 kb on + strand, within Pf6N2E2_3413 at 3956.547 kb on + strand, within Pf6N2E2_3413 at 3956.547 kb on + strand, within Pf6N2E2_3413 at 3956.548 kb on - strand, within Pf6N2E2_3413 at 3956.548 kb on - strand, within Pf6N2E2_3413 at 3956.548 kb on - strand, within Pf6N2E2_3413 at 3956.548 kb on - strand, within Pf6N2E2_3413 at 3956.548 kb on - strand, within Pf6N2E2_3413 at 3956.548 kb on - strand, within Pf6N2E2_3413 at 3956.548 kb on - strand, within Pf6N2E2_3413 at 3956.548 kb on - strand, within Pf6N2E2_3413 at 3956.548 kb on - strand, within Pf6N2E2_3413 at 3956.707 kb on - strand at 3956.707 kb on - strand at 3956.786 kb on + strand at 3956.786 kb on + strand at 3956.786 kb on + strand at 3956.786 kb on + strand at 3956.791 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cerium(III) chloride 0.000195313 M remove 3,954,337 - +0.8 3,954,500 + Pf6N2E2_3410 0.27 -0.1 3,954,657 - Pf6N2E2_3410 0.46 -0.5 3,954,657 - Pf6N2E2_3410 0.46 +0.3 3,954,657 - Pf6N2E2_3410 0.46 +0.2 3,954,657 - Pf6N2E2_3410 0.46 -0.1 3,954,659 + Pf6N2E2_3410 0.47 -0.6 3,954,659 + Pf6N2E2_3410 0.47 +0.1 3,954,660 - Pf6N2E2_3410 0.47 -0.5 3,954,660 - Pf6N2E2_3410 0.47 -0.1 3,954,711 + Pf6N2E2_3410 0.53 +0.8 3,954,711 + Pf6N2E2_3410 0.53 -1.5 3,955,121 + -0.2 3,955,121 + +1.2 3,955,122 - +1.3 3,955,138 - +0.1 3,955,160 + Pf6N2E2_3411 0.21 +1.1 3,955,161 - Pf6N2E2_3411 0.22 -0.4 3,955,161 - Pf6N2E2_3411 0.22 +0.3 3,955,161 - Pf6N2E2_3411 0.22 -0.1 3,955,161 - Pf6N2E2_3411 0.22 -0.0 3,955,187 + Pf6N2E2_3411 0.43 -0.1 3,955,187 + Pf6N2E2_3411 0.43 +0.7 3,955,188 - Pf6N2E2_3411 0.44 +0.3 3,955,193 + Pf6N2E2_3411 0.48 -0.9 3,955,193 + Pf6N2E2_3411 0.48 +0.5 3,955,193 + Pf6N2E2_3411 0.48 -0.3 3,955,193 + Pf6N2E2_3411 0.48 +1.0 3,955,194 - Pf6N2E2_3411 0.48 +0.0 3,955,490 - Pf6N2E2_3412 0.41 +0.4 3,955,555 + Pf6N2E2_3412 0.52 -1.3 3,955,555 + Pf6N2E2_3412 0.52 +1.1 3,955,556 - Pf6N2E2_3412 0.53 +0.4 3,955,640 + Pf6N2E2_3412 0.68 +0.7 3,955,640 + Pf6N2E2_3412 0.68 +0.2 3,955,641 - Pf6N2E2_3412 0.68 +1.7 3,955,689 - Pf6N2E2_3412 0.77 -1.3 3,955,724 + Pf6N2E2_3412 0.83 +0.3 3,955,725 - Pf6N2E2_3412 0.83 +0.8 3,955,752 + Pf6N2E2_3412 0.88 -0.3 3,955,752 + Pf6N2E2_3412 0.88 -0.8 3,955,752 + Pf6N2E2_3412 0.88 +0.4 3,955,753 - Pf6N2E2_3412 0.88 +0.6 3,955,792 + -0.2 3,955,793 - -0.7 3,955,817 - -0.7 3,956,118 - Pf6N2E2_3413 0.29 +0.2 3,956,234 + Pf6N2E2_3413 0.41 +0.5 3,956,235 - Pf6N2E2_3413 0.42 +0.3 3,956,235 - Pf6N2E2_3413 0.42 +0.2 3,956,235 - Pf6N2E2_3413 0.42 +0.1 3,956,235 - Pf6N2E2_3413 0.42 +1.1 3,956,235 - Pf6N2E2_3413 0.42 +0.7 3,956,235 - Pf6N2E2_3413 0.42 +0.9 3,956,235 - Pf6N2E2_3413 0.42 +0.5 3,956,235 - Pf6N2E2_3413 0.42 +0.3 3,956,235 - Pf6N2E2_3413 0.42 +1.1 3,956,355 + Pf6N2E2_3413 0.54 +0.0 3,956,355 + Pf6N2E2_3413 0.54 +0.7 3,956,547 + Pf6N2E2_3413 0.74 -0.2 3,956,547 + Pf6N2E2_3413 0.74 +0.9 3,956,547 + Pf6N2E2_3413 0.74 +1.2 3,956,547 + Pf6N2E2_3413 0.74 -0.7 3,956,548 - Pf6N2E2_3413 0.75 -0.9 3,956,548 - Pf6N2E2_3413 0.75 +0.7 3,956,548 - Pf6N2E2_3413 0.75 +1.4 3,956,548 - Pf6N2E2_3413 0.75 +0.1 3,956,548 - Pf6N2E2_3413 0.75 +0.4 3,956,548 - Pf6N2E2_3413 0.75 -1.4 3,956,548 - Pf6N2E2_3413 0.75 +0.8 3,956,548 - Pf6N2E2_3413 0.75 +1.0 3,956,548 - Pf6N2E2_3413 0.75 -0.4 3,956,707 - +0.4 3,956,707 - -1.2 3,956,786 + +0.3 3,956,786 + -0.4 3,956,786 + +0.4 3,956,786 + +1.1 3,956,791 - +0.3
Or see this region's nucleotide sequence