Experiment: Cerium(III) chloride 0.000195313 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3340 and Pf6N2E2_3341 are separated by 20 nucleotides Pf6N2E2_3341 and Pf6N2E2_3342 are separated by 131 nucleotides
Pf6N2E2_3340 - Fructose repressor FruR, LacI family, at 3,866,567 to 3,867,562
_3340
Pf6N2E2_3341 - Putative deoxyribonuclease YjjV, at 3,867,583 to 3,868,359
_3341
Pf6N2E2_3342 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 3,868,491 to 3,870,521
_3342
Position (kb)
3867
3868
3869 Strain fitness (log2 ratio)
-2
-1
0
1 at 3866.621 kb on + strand at 3866.621 kb on + strand at 3866.621 kb on + strand at 3866.621 kb on + strand at 3866.621 kb on + strand at 3866.621 kb on + strand at 3866.621 kb on + strand at 3866.621 kb on + strand at 3866.621 kb on + strand at 3866.621 kb on + strand at 3866.622 kb on - strand at 3866.622 kb on - strand at 3866.622 kb on - strand at 3866.622 kb on - strand at 3866.622 kb on - strand at 3866.622 kb on - strand at 3866.622 kb on - strand at 3866.622 kb on - strand at 3866.622 kb on - strand at 3866.622 kb on - strand at 3866.622 kb on - strand at 3866.653 kb on + strand at 3866.653 kb on + strand at 3866.653 kb on + strand at 3866.653 kb on + strand at 3866.654 kb on - strand at 3866.654 kb on - strand at 3866.654 kb on - strand at 3866.792 kb on + strand, within Pf6N2E2_3340 at 3866.792 kb on + strand, within Pf6N2E2_3340 at 3866.793 kb on - strand, within Pf6N2E2_3340 at 3866.841 kb on - strand, within Pf6N2E2_3340 at 3866.967 kb on - strand, within Pf6N2E2_3340 at 3866.967 kb on - strand, within Pf6N2E2_3340 at 3866.967 kb on - strand, within Pf6N2E2_3340 at 3867.301 kb on + strand, within Pf6N2E2_3340 at 3867.301 kb on + strand, within Pf6N2E2_3340 at 3867.301 kb on + strand, within Pf6N2E2_3340 at 3867.302 kb on - strand, within Pf6N2E2_3340 at 3867.302 kb on - strand, within Pf6N2E2_3340 at 3867.302 kb on - strand, within Pf6N2E2_3340 at 3867.308 kb on + strand, within Pf6N2E2_3340 at 3867.308 kb on + strand, within Pf6N2E2_3340 at 3867.308 kb on + strand, within Pf6N2E2_3340 at 3867.308 kb on + strand, within Pf6N2E2_3340 at 3867.308 kb on + strand, within Pf6N2E2_3340 at 3867.308 kb on + strand, within Pf6N2E2_3340 at 3867.308 kb on + strand, within Pf6N2E2_3340 at 3867.308 kb on + strand, within Pf6N2E2_3340 at 3867.308 kb on + strand, within Pf6N2E2_3340 at 3867.308 kb on + strand, within Pf6N2E2_3340 at 3867.308 kb on + strand, within Pf6N2E2_3340 at 3867.308 kb on + strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.309 kb on - strand, within Pf6N2E2_3340 at 3867.312 kb on + strand, within Pf6N2E2_3340 at 3867.312 kb on + strand, within Pf6N2E2_3340 at 3867.312 kb on + strand, within Pf6N2E2_3340 at 3867.312 kb on + strand, within Pf6N2E2_3340 at 3867.313 kb on - strand, within Pf6N2E2_3340 at 3867.313 kb on - strand, within Pf6N2E2_3340 at 3867.313 kb on - strand, within Pf6N2E2_3340 at 3867.313 kb on - strand, within Pf6N2E2_3340 at 3867.313 kb on - strand, within Pf6N2E2_3340 at 3867.313 kb on - strand, within Pf6N2E2_3340 at 3867.313 kb on - strand, within Pf6N2E2_3340 at 3867.313 kb on - strand, within Pf6N2E2_3340 at 3867.340 kb on - strand, within Pf6N2E2_3340 at 3867.503 kb on + strand at 3867.503 kb on + strand at 3867.504 kb on - strand at 3867.548 kb on - strand at 3867.548 kb on - strand at 3867.782 kb on - strand, within Pf6N2E2_3341 at 3867.782 kb on - strand, within Pf6N2E2_3341 at 3867.782 kb on - strand, within Pf6N2E2_3341 at 3867.816 kb on - strand, within Pf6N2E2_3341 at 3867.886 kb on + strand, within Pf6N2E2_3341 at 3867.886 kb on + strand, within Pf6N2E2_3341 at 3867.886 kb on + strand, within Pf6N2E2_3341 at 3867.887 kb on - strand, within Pf6N2E2_3341 at 3867.887 kb on - strand, within Pf6N2E2_3341 at 3867.887 kb on - strand, within Pf6N2E2_3341 at 3867.887 kb on - strand, within Pf6N2E2_3341 at 3867.887 kb on - strand, within Pf6N2E2_3341 at 3867.889 kb on + strand, within Pf6N2E2_3341 at 3867.890 kb on - strand, within Pf6N2E2_3341 at 3867.890 kb on - strand, within Pf6N2E2_3341 at 3867.890 kb on - strand, within Pf6N2E2_3341 at 3867.890 kb on - strand, within Pf6N2E2_3341 at 3867.890 kb on - strand, within Pf6N2E2_3341 at 3867.890 kb on - strand, within Pf6N2E2_3341 at 3867.890 kb on - strand, within Pf6N2E2_3341 at 3867.941 kb on + strand, within Pf6N2E2_3341 at 3867.941 kb on + strand, within Pf6N2E2_3341 at 3867.941 kb on + strand, within Pf6N2E2_3341 at 3867.941 kb on + strand, within Pf6N2E2_3341 at 3867.941 kb on + strand, within Pf6N2E2_3341 at 3867.941 kb on + strand, within Pf6N2E2_3341 at 3867.942 kb on - strand, within Pf6N2E2_3341 at 3867.942 kb on - strand, within Pf6N2E2_3341 at 3867.942 kb on - strand, within Pf6N2E2_3341 at 3867.942 kb on - strand, within Pf6N2E2_3341 at 3868.087 kb on + strand, within Pf6N2E2_3341 at 3868.087 kb on + strand, within Pf6N2E2_3341 at 3868.087 kb on + strand, within Pf6N2E2_3341 at 3868.088 kb on - strand, within Pf6N2E2_3341 at 3868.357 kb on + strand at 3868.357 kb on + strand at 3868.357 kb on + strand at 3868.485 kb on + strand at 3868.485 kb on + strand at 3868.485 kb on + strand at 3868.485 kb on + strand at 3868.486 kb on - strand at 3868.486 kb on - strand at 3868.486 kb on - strand at 3868.656 kb on + strand at 3868.713 kb on - strand, within Pf6N2E2_3342 at 3869.312 kb on + strand, within Pf6N2E2_3342 at 3869.313 kb on - strand, within Pf6N2E2_3342 at 3869.313 kb on - strand, within Pf6N2E2_3342 at 3869.355 kb on - strand, within Pf6N2E2_3342
Per-strain Table
Position Strand Gene LocusTag Fraction Cerium(III) chloride 0.000195313 M remove 3,866,621 + +0.4 3,866,621 + +0.6 3,866,621 + +0.6 3,866,621 + +0.2 3,866,621 + -0.1 3,866,621 + -0.9 3,866,621 + +0.8 3,866,621 + -0.2 3,866,621 + +0.7 3,866,621 + +0.4 3,866,622 - -0.5 3,866,622 - +0.4 3,866,622 - -0.1 3,866,622 - +0.1 3,866,622 - -0.3 3,866,622 - -0.7 3,866,622 - +0.9 3,866,622 - -1.1 3,866,622 - -0.6 3,866,622 - -0.4 3,866,622 - -0.5 3,866,653 + +0.8 3,866,653 + +0.2 3,866,653 + -1.8 3,866,653 + -1.0 3,866,654 - +0.4 3,866,654 - -0.3 3,866,654 - +0.5 3,866,792 + Pf6N2E2_3340 0.23 +0.2 3,866,792 + Pf6N2E2_3340 0.23 +0.5 3,866,793 - Pf6N2E2_3340 0.23 +0.6 3,866,841 - Pf6N2E2_3340 0.28 -0.6 3,866,967 - Pf6N2E2_3340 0.40 -0.6 3,866,967 - Pf6N2E2_3340 0.40 +0.3 3,866,967 - Pf6N2E2_3340 0.40 -0.0 3,867,301 + Pf6N2E2_3340 0.74 +0.1 3,867,301 + Pf6N2E2_3340 0.74 -0.1 3,867,301 + Pf6N2E2_3340 0.74 -0.6 3,867,302 - Pf6N2E2_3340 0.74 +0.8 3,867,302 - Pf6N2E2_3340 0.74 +1.3 3,867,302 - Pf6N2E2_3340 0.74 -0.4 3,867,308 + Pf6N2E2_3340 0.74 +0.1 3,867,308 + Pf6N2E2_3340 0.74 +0.2 3,867,308 + Pf6N2E2_3340 0.74 -0.4 3,867,308 + Pf6N2E2_3340 0.74 +0.7 3,867,308 + Pf6N2E2_3340 0.74 -0.8 3,867,308 + Pf6N2E2_3340 0.74 -0.2 3,867,308 + Pf6N2E2_3340 0.74 -0.3 3,867,308 + Pf6N2E2_3340 0.74 +0.1 3,867,308 + Pf6N2E2_3340 0.74 +0.7 3,867,308 + Pf6N2E2_3340 0.74 -0.5 3,867,308 + Pf6N2E2_3340 0.74 +0.0 3,867,308 + Pf6N2E2_3340 0.74 -0.6 3,867,309 - Pf6N2E2_3340 0.74 -0.1 3,867,309 - Pf6N2E2_3340 0.74 -0.1 3,867,309 - Pf6N2E2_3340 0.74 +0.7 3,867,309 - Pf6N2E2_3340 0.74 -0.5 3,867,309 - Pf6N2E2_3340 0.74 -1.2 3,867,309 - Pf6N2E2_3340 0.74 -0.4 3,867,309 - Pf6N2E2_3340 0.74 -1.0 3,867,309 - Pf6N2E2_3340 0.74 +0.3 3,867,309 - Pf6N2E2_3340 0.74 -0.6 3,867,309 - Pf6N2E2_3340 0.74 -0.2 3,867,309 - Pf6N2E2_3340 0.74 -0.2 3,867,309 - Pf6N2E2_3340 0.74 -0.1 3,867,309 - Pf6N2E2_3340 0.74 +0.1 3,867,309 - Pf6N2E2_3340 0.74 -0.1 3,867,309 - Pf6N2E2_3340 0.74 +1.4 3,867,309 - Pf6N2E2_3340 0.74 +0.1 3,867,309 - Pf6N2E2_3340 0.74 -0.7 3,867,309 - Pf6N2E2_3340 0.74 -0.4 3,867,312 + Pf6N2E2_3340 0.75 +0.9 3,867,312 + Pf6N2E2_3340 0.75 -0.4 3,867,312 + Pf6N2E2_3340 0.75 -0.1 3,867,312 + Pf6N2E2_3340 0.75 +0.7 3,867,313 - Pf6N2E2_3340 0.75 +0.2 3,867,313 - Pf6N2E2_3340 0.75 +0.3 3,867,313 - Pf6N2E2_3340 0.75 -0.2 3,867,313 - Pf6N2E2_3340 0.75 +1.2 3,867,313 - Pf6N2E2_3340 0.75 +0.7 3,867,313 - Pf6N2E2_3340 0.75 +0.1 3,867,313 - Pf6N2E2_3340 0.75 -0.1 3,867,313 - Pf6N2E2_3340 0.75 -0.1 3,867,340 - Pf6N2E2_3340 0.78 +1.5 3,867,503 + +0.0 3,867,503 + +0.0 3,867,504 - -0.1 3,867,548 - +0.6 3,867,548 - -0.1 3,867,782 - Pf6N2E2_3341 0.26 -1.4 3,867,782 - Pf6N2E2_3341 0.26 +1.3 3,867,782 - Pf6N2E2_3341 0.26 -0.1 3,867,816 - Pf6N2E2_3341 0.30 -0.8 3,867,886 + Pf6N2E2_3341 0.39 -0.1 3,867,886 + Pf6N2E2_3341 0.39 +0.5 3,867,886 + Pf6N2E2_3341 0.39 +0.4 3,867,887 - Pf6N2E2_3341 0.39 -0.5 3,867,887 - Pf6N2E2_3341 0.39 -0.2 3,867,887 - Pf6N2E2_3341 0.39 -1.2 3,867,887 - Pf6N2E2_3341 0.39 +0.1 3,867,887 - Pf6N2E2_3341 0.39 +0.4 3,867,889 + Pf6N2E2_3341 0.39 +0.4 3,867,890 - Pf6N2E2_3341 0.40 +0.0 3,867,890 - Pf6N2E2_3341 0.40 -0.2 3,867,890 - Pf6N2E2_3341 0.40 +0.6 3,867,890 - Pf6N2E2_3341 0.40 -0.1 3,867,890 - Pf6N2E2_3341 0.40 +0.1 3,867,890 - Pf6N2E2_3341 0.40 +1.0 3,867,890 - Pf6N2E2_3341 0.40 +0.0 3,867,941 + Pf6N2E2_3341 0.46 -0.2 3,867,941 + Pf6N2E2_3341 0.46 +0.4 3,867,941 + Pf6N2E2_3341 0.46 +0.9 3,867,941 + Pf6N2E2_3341 0.46 +0.4 3,867,941 + Pf6N2E2_3341 0.46 +0.3 3,867,941 + Pf6N2E2_3341 0.46 -0.2 3,867,942 - Pf6N2E2_3341 0.46 +0.4 3,867,942 - Pf6N2E2_3341 0.46 -0.0 3,867,942 - Pf6N2E2_3341 0.46 +0.3 3,867,942 - Pf6N2E2_3341 0.46 -0.9 3,868,087 + Pf6N2E2_3341 0.65 -2.5 3,868,087 + Pf6N2E2_3341 0.65 +0.8 3,868,087 + Pf6N2E2_3341 0.65 +0.1 3,868,088 - Pf6N2E2_3341 0.65 -0.3 3,868,357 + +0.3 3,868,357 + -0.1 3,868,357 + -0.8 3,868,485 + -0.6 3,868,485 + +0.3 3,868,485 + +0.7 3,868,485 + +0.6 3,868,486 - +0.4 3,868,486 - -0.3 3,868,486 - +0.6 3,868,656 + -0.0 3,868,713 - Pf6N2E2_3342 0.11 +1.0 3,869,312 + Pf6N2E2_3342 0.40 +0.7 3,869,313 - Pf6N2E2_3342 0.40 +1.2 3,869,313 - Pf6N2E2_3342 0.40 -1.2 3,869,355 - Pf6N2E2_3342 0.43 +0.5
Or see this region's nucleotide sequence