Experiment: Cerium(III) chloride 0.000195313 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2809 and Pf6N2E2_2810 are separated by 116 nucleotides Pf6N2E2_2810 and Pf6N2E2_2811 are separated by 1 nucleotides Pf6N2E2_2811 and Pf6N2E2_2812 are separated by 233 nucleotides
Pf6N2E2_2809 - Periplasmic beta-glucosidase (EC 3.2.1.21), at 3,295,806 to 3,298,097
_2809
Pf6N2E2_2810 - Cardiolipin synthetase (EC 2.7.8.-), at 3,298,214 to 3,299,371
_2810
Pf6N2E2_2811 - FIG00956006: hypothetical protein, at 3,299,373 to 3,299,963
_2811
Pf6N2E2_2812 - FIG00953409: hypothetical protein, at 3,300,197 to 3,300,508
_2812
Position (kb)
3298
3299
3300 Strain fitness (log2 ratio)
-2
-1
0
1 at 3297.244 kb on + strand, within Pf6N2E2_2809 at 3297.244 kb on + strand, within Pf6N2E2_2809 at 3297.244 kb on + strand, within Pf6N2E2_2809 at 3297.245 kb on - strand, within Pf6N2E2_2809 at 3297.286 kb on + strand, within Pf6N2E2_2809 at 3297.326 kb on - strand, within Pf6N2E2_2809 at 3297.564 kb on + strand, within Pf6N2E2_2809 at 3297.564 kb on + strand, within Pf6N2E2_2809 at 3297.565 kb on - strand, within Pf6N2E2_2809 at 3297.565 kb on - strand, within Pf6N2E2_2809 at 3297.624 kb on + strand, within Pf6N2E2_2809 at 3297.624 kb on + strand, within Pf6N2E2_2809 at 3297.624 kb on + strand, within Pf6N2E2_2809 at 3297.625 kb on - strand, within Pf6N2E2_2809 at 3297.627 kb on + strand, within Pf6N2E2_2809 at 3297.627 kb on + strand, within Pf6N2E2_2809 at 3297.627 kb on + strand, within Pf6N2E2_2809 at 3297.627 kb on + strand, within Pf6N2E2_2809 at 3297.628 kb on - strand, within Pf6N2E2_2809 at 3297.628 kb on - strand, within Pf6N2E2_2809 at 3297.628 kb on - strand, within Pf6N2E2_2809 at 3297.628 kb on - strand, within Pf6N2E2_2809 at 3297.628 kb on - strand, within Pf6N2E2_2809 at 3297.628 kb on - strand, within Pf6N2E2_2809 at 3297.628 kb on - strand, within Pf6N2E2_2809 at 3297.678 kb on + strand, within Pf6N2E2_2809 at 3297.678 kb on + strand, within Pf6N2E2_2809 at 3297.678 kb on + strand, within Pf6N2E2_2809 at 3297.678 kb on + strand, within Pf6N2E2_2809 at 3297.678 kb on + strand, within Pf6N2E2_2809 at 3297.679 kb on - strand, within Pf6N2E2_2809 at 3297.691 kb on - strand, within Pf6N2E2_2809 at 3297.741 kb on + strand, within Pf6N2E2_2809 at 3297.742 kb on - strand, within Pf6N2E2_2809 at 3297.867 kb on + strand, within Pf6N2E2_2809 at 3297.867 kb on + strand, within Pf6N2E2_2809 at 3297.867 kb on + strand, within Pf6N2E2_2809 at 3297.868 kb on - strand at 3297.868 kb on - strand at 3297.868 kb on - strand at 3297.868 kb on - strand at 3297.868 kb on - strand at 3297.868 kb on - strand at 3297.868 kb on - strand at 3297.868 kb on - strand at 3298.014 kb on + strand at 3298.014 kb on + strand at 3298.015 kb on - strand at 3298.015 kb on - strand at 3298.042 kb on + strand at 3298.042 kb on + strand at 3298.043 kb on - strand at 3298.043 kb on - strand at 3298.178 kb on + strand at 3298.179 kb on - strand at 3298.198 kb on + strand at 3298.199 kb on - strand at 3298.199 kb on - strand at 3298.199 kb on - strand at 3298.199 kb on - strand at 3298.672 kb on - strand, within Pf6N2E2_2810 at 3298.917 kb on + strand, within Pf6N2E2_2810 at 3299.079 kb on + strand, within Pf6N2E2_2810 at 3299.087 kb on + strand, within Pf6N2E2_2810 at 3299.088 kb on - strand, within Pf6N2E2_2810 at 3299.088 kb on - strand, within Pf6N2E2_2810 at 3299.149 kb on - strand, within Pf6N2E2_2810 at 3299.149 kb on - strand, within Pf6N2E2_2810 at 3299.244 kb on + strand, within Pf6N2E2_2810 at 3299.244 kb on + strand, within Pf6N2E2_2810 at 3299.245 kb on - strand, within Pf6N2E2_2810 at 3299.563 kb on + strand, within Pf6N2E2_2811 at 3299.563 kb on + strand, within Pf6N2E2_2811 at 3299.563 kb on + strand, within Pf6N2E2_2811 at 3299.563 kb on + strand, within Pf6N2E2_2811 at 3299.564 kb on - strand, within Pf6N2E2_2811 at 3299.564 kb on - strand, within Pf6N2E2_2811 at 3299.564 kb on - strand, within Pf6N2E2_2811 at 3299.564 kb on - strand, within Pf6N2E2_2811 at 3299.564 kb on - strand, within Pf6N2E2_2811 at 3299.564 kb on - strand, within Pf6N2E2_2811 at 3299.843 kb on + strand, within Pf6N2E2_2811 at 3299.844 kb on - strand, within Pf6N2E2_2811 at 3299.963 kb on + strand at 3299.963 kb on + strand at 3299.963 kb on + strand at 3299.963 kb on + strand at 3299.964 kb on - strand at 3299.964 kb on - strand at 3299.964 kb on - strand at 3299.964 kb on - strand at 3299.964 kb on - strand at 3299.964 kb on - strand at 3299.982 kb on + strand at 3299.982 kb on + strand at 3299.982 kb on + strand at 3299.982 kb on + strand at 3299.982 kb on + strand at 3299.983 kb on - strand at 3299.983 kb on - strand at 3299.983 kb on - strand at 3299.983 kb on - strand at 3299.983 kb on - strand at 3299.983 kb on - strand at 3300.058 kb on + strand at 3300.058 kb on + strand at 3300.058 kb on + strand at 3300.058 kb on + strand at 3300.059 kb on - strand at 3300.059 kb on - strand at 3300.059 kb on - strand at 3300.059 kb on - strand at 3300.250 kb on + strand, within Pf6N2E2_2812 at 3300.251 kb on - strand, within Pf6N2E2_2812 at 3300.251 kb on - strand, within Pf6N2E2_2812 at 3300.271 kb on + strand, within Pf6N2E2_2812 at 3300.330 kb on + strand, within Pf6N2E2_2812 at 3300.330 kb on + strand, within Pf6N2E2_2812 at 3300.331 kb on - strand, within Pf6N2E2_2812 at 3300.331 kb on - strand, within Pf6N2E2_2812 at 3300.331 kb on - strand, within Pf6N2E2_2812 at 3300.342 kb on + strand, within Pf6N2E2_2812 at 3300.366 kb on + strand, within Pf6N2E2_2812
Per-strain Table
Position Strand Gene LocusTag Fraction Cerium(III) chloride 0.000195313 M remove 3,297,244 + Pf6N2E2_2809 0.63 -1.0 3,297,244 + Pf6N2E2_2809 0.63 +0.2 3,297,244 + Pf6N2E2_2809 0.63 -0.2 3,297,245 - Pf6N2E2_2809 0.63 -0.0 3,297,286 + Pf6N2E2_2809 0.65 -0.3 3,297,326 - Pf6N2E2_2809 0.66 -0.5 3,297,564 + Pf6N2E2_2809 0.77 +0.3 3,297,564 + Pf6N2E2_2809 0.77 -1.2 3,297,565 - Pf6N2E2_2809 0.77 -0.5 3,297,565 - Pf6N2E2_2809 0.77 +1.5 3,297,624 + Pf6N2E2_2809 0.79 -0.4 3,297,624 + Pf6N2E2_2809 0.79 +0.4 3,297,624 + Pf6N2E2_2809 0.79 +1.0 3,297,625 - Pf6N2E2_2809 0.79 -0.5 3,297,627 + Pf6N2E2_2809 0.79 +0.3 3,297,627 + Pf6N2E2_2809 0.79 +1.2 3,297,627 + Pf6N2E2_2809 0.79 +0.6 3,297,627 + Pf6N2E2_2809 0.79 +0.1 3,297,628 - Pf6N2E2_2809 0.79 -0.1 3,297,628 - Pf6N2E2_2809 0.79 -1.8 3,297,628 - Pf6N2E2_2809 0.79 +0.1 3,297,628 - Pf6N2E2_2809 0.79 -0.4 3,297,628 - Pf6N2E2_2809 0.79 -0.0 3,297,628 - Pf6N2E2_2809 0.79 +0.5 3,297,628 - Pf6N2E2_2809 0.79 +1.0 3,297,678 + Pf6N2E2_2809 0.82 -0.5 3,297,678 + Pf6N2E2_2809 0.82 -1.6 3,297,678 + Pf6N2E2_2809 0.82 -0.7 3,297,678 + Pf6N2E2_2809 0.82 -0.4 3,297,678 + Pf6N2E2_2809 0.82 +0.7 3,297,679 - Pf6N2E2_2809 0.82 +0.6 3,297,691 - Pf6N2E2_2809 0.82 +0.4 3,297,741 + Pf6N2E2_2809 0.84 -0.1 3,297,742 - Pf6N2E2_2809 0.84 -0.8 3,297,867 + Pf6N2E2_2809 0.90 -0.4 3,297,867 + Pf6N2E2_2809 0.90 +0.3 3,297,867 + Pf6N2E2_2809 0.90 +0.2 3,297,868 - -0.2 3,297,868 - +0.9 3,297,868 - +1.2 3,297,868 - -0.9 3,297,868 - -0.2 3,297,868 - -0.4 3,297,868 - -0.3 3,297,868 - -0.1 3,298,014 + -0.0 3,298,014 + +0.3 3,298,015 - -0.2 3,298,015 - -0.6 3,298,042 + +0.4 3,298,042 + +0.3 3,298,043 - +0.6 3,298,043 - -0.3 3,298,178 + +1.0 3,298,179 - -1.1 3,298,198 + -0.8 3,298,199 - -0.3 3,298,199 - +0.9 3,298,199 - +1.0 3,298,199 - +0.4 3,298,672 - Pf6N2E2_2810 0.40 +1.3 3,298,917 + Pf6N2E2_2810 0.61 -0.4 3,299,079 + Pf6N2E2_2810 0.75 +0.6 3,299,087 + Pf6N2E2_2810 0.75 +0.1 3,299,088 - Pf6N2E2_2810 0.75 +0.6 3,299,088 - Pf6N2E2_2810 0.75 +0.1 3,299,149 - Pf6N2E2_2810 0.81 -0.4 3,299,149 - Pf6N2E2_2810 0.81 +0.8 3,299,244 + Pf6N2E2_2810 0.89 +0.8 3,299,244 + Pf6N2E2_2810 0.89 -0.7 3,299,245 - Pf6N2E2_2810 0.89 +1.0 3,299,563 + Pf6N2E2_2811 0.32 +1.2 3,299,563 + Pf6N2E2_2811 0.32 +0.2 3,299,563 + Pf6N2E2_2811 0.32 +0.6 3,299,563 + Pf6N2E2_2811 0.32 +0.8 3,299,564 - Pf6N2E2_2811 0.32 -0.9 3,299,564 - Pf6N2E2_2811 0.32 +0.1 3,299,564 - Pf6N2E2_2811 0.32 +0.6 3,299,564 - Pf6N2E2_2811 0.32 +0.2 3,299,564 - Pf6N2E2_2811 0.32 -0.4 3,299,564 - Pf6N2E2_2811 0.32 +1.4 3,299,843 + Pf6N2E2_2811 0.80 -0.7 3,299,844 - Pf6N2E2_2811 0.80 +0.4 3,299,963 + +0.4 3,299,963 + +0.8 3,299,963 + +0.1 3,299,963 + +0.1 3,299,964 - +0.4 3,299,964 - -0.3 3,299,964 - +0.7 3,299,964 - -0.0 3,299,964 - +0.3 3,299,964 - -1.8 3,299,982 + -0.0 3,299,982 + -2.5 3,299,982 + -0.6 3,299,982 + -0.4 3,299,982 + -0.2 3,299,983 - -0.9 3,299,983 - +0.2 3,299,983 - -0.1 3,299,983 - -0.3 3,299,983 - +0.4 3,299,983 - +0.2 3,300,058 + +0.8 3,300,058 + -0.2 3,300,058 + -0.4 3,300,058 + -0.3 3,300,059 - -1.2 3,300,059 - +0.4 3,300,059 - +0.8 3,300,059 - -1.5 3,300,250 + Pf6N2E2_2812 0.17 +0.9 3,300,251 - Pf6N2E2_2812 0.17 +0.5 3,300,251 - Pf6N2E2_2812 0.17 +0.3 3,300,271 + Pf6N2E2_2812 0.24 +0.4 3,300,330 + Pf6N2E2_2812 0.43 +0.2 3,300,330 + Pf6N2E2_2812 0.43 +0.6 3,300,331 - Pf6N2E2_2812 0.43 +0.1 3,300,331 - Pf6N2E2_2812 0.43 +0.6 3,300,331 - Pf6N2E2_2812 0.43 +0.8 3,300,342 + Pf6N2E2_2812 0.46 +0.5 3,300,366 + Pf6N2E2_2812 0.54 +0.2
Or see this region's nucleotide sequence