Experiment: Cerium(III) chloride 0.000195313 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2803 and Pf6N2E2_2804 are separated by 166 nucleotides Pf6N2E2_2804 and Pf6N2E2_2805 are separated by 81 nucleotides Pf6N2E2_2805 and Pf6N2E2_2806 are separated by 129 nucleotides
Pf6N2E2_2803 - FIG00953317: hypothetical protein, at 3,289,641 to 3,290,660
_2803
Pf6N2E2_2804 - FIG00955946: hypothetical protein, at 3,290,827 to 3,291,171
_2804
Pf6N2E2_2805 - ThiJ/PfpI family protein, at 3,291,253 to 3,291,834
_2805
Pf6N2E2_2806 - Methyltransferase (EC 2.1.1.-), at 3,291,964 to 3,293,181
_2806
Position (kb)
3290
3291
3292 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3289.944 kb on + strand, within Pf6N2E2_2803 at 3289.945 kb on - strand, within Pf6N2E2_2803 at 3290.074 kb on - strand, within Pf6N2E2_2803 at 3290.074 kb on - strand, within Pf6N2E2_2803 at 3290.074 kb on - strand, within Pf6N2E2_2803 at 3290.193 kb on + strand, within Pf6N2E2_2803 at 3290.193 kb on + strand, within Pf6N2E2_2803 at 3290.379 kb on + strand, within Pf6N2E2_2803 at 3290.380 kb on - strand, within Pf6N2E2_2803 at 3290.380 kb on - strand, within Pf6N2E2_2803 at 3290.380 kb on - strand, within Pf6N2E2_2803 at 3290.380 kb on - strand, within Pf6N2E2_2803 at 3290.394 kb on + strand, within Pf6N2E2_2803 at 3290.517 kb on + strand, within Pf6N2E2_2803 at 3290.517 kb on + strand, within Pf6N2E2_2803 at 3290.518 kb on - strand, within Pf6N2E2_2803 at 3290.559 kb on + strand at 3290.559 kb on + strand at 3290.560 kb on - strand at 3290.681 kb on - strand at 3290.921 kb on + strand, within Pf6N2E2_2804 at 3290.921 kb on + strand, within Pf6N2E2_2804 at 3290.921 kb on + strand, within Pf6N2E2_2804 at 3290.922 kb on - strand, within Pf6N2E2_2804 at 3290.972 kb on + strand, within Pf6N2E2_2804 at 3290.972 kb on + strand, within Pf6N2E2_2804 at 3290.972 kb on + strand, within Pf6N2E2_2804 at 3290.972 kb on + strand, within Pf6N2E2_2804 at 3290.972 kb on + strand, within Pf6N2E2_2804 at 3290.973 kb on - strand, within Pf6N2E2_2804 at 3290.973 kb on - strand, within Pf6N2E2_2804 at 3290.973 kb on - strand, within Pf6N2E2_2804 at 3291.005 kb on + strand, within Pf6N2E2_2804 at 3291.005 kb on + strand, within Pf6N2E2_2804 at 3291.005 kb on + strand, within Pf6N2E2_2804 at 3291.074 kb on + strand, within Pf6N2E2_2804 at 3291.074 kb on + strand, within Pf6N2E2_2804 at 3291.074 kb on + strand, within Pf6N2E2_2804 at 3291.074 kb on + strand, within Pf6N2E2_2804 at 3291.074 kb on + strand, within Pf6N2E2_2804 at 3291.074 kb on + strand, within Pf6N2E2_2804 at 3291.075 kb on - strand, within Pf6N2E2_2804 at 3291.075 kb on - strand, within Pf6N2E2_2804 at 3291.075 kb on - strand, within Pf6N2E2_2804 at 3291.075 kb on - strand at 3291.075 kb on - strand, within Pf6N2E2_2804 at 3291.119 kb on - strand, within Pf6N2E2_2804 at 3291.208 kb on + strand at 3291.208 kb on + strand at 3291.251 kb on + strand at 3291.251 kb on + strand at 3291.252 kb on - strand at 3291.252 kb on - strand at 3291.252 kb on - strand at 3291.252 kb on - strand at 3291.252 kb on - strand at 3291.254 kb on + strand at 3291.254 kb on + strand at 3291.254 kb on + strand at 3291.254 kb on + strand at 3291.254 kb on + strand at 3291.254 kb on + strand at 3291.254 kb on + strand at 3291.254 kb on + strand at 3291.255 kb on - strand at 3291.255 kb on - strand at 3291.255 kb on - strand at 3291.255 kb on - strand at 3291.255 kb on - strand at 3291.255 kb on - strand at 3291.255 kb on - strand at 3291.255 kb on - strand at 3291.255 kb on - strand at 3291.255 kb on - strand at 3291.376 kb on - strand, within Pf6N2E2_2805 at 3291.377 kb on + strand, within Pf6N2E2_2805 at 3291.377 kb on + strand, within Pf6N2E2_2805 at 3291.377 kb on + strand, within Pf6N2E2_2805 at 3291.377 kb on + strand, within Pf6N2E2_2805 at 3291.377 kb on + strand, within Pf6N2E2_2805 at 3291.377 kb on + strand, within Pf6N2E2_2805 at 3291.377 kb on + strand, within Pf6N2E2_2805 at 3291.377 kb on + strand, within Pf6N2E2_2805 at 3291.377 kb on + strand, within Pf6N2E2_2805 at 3291.377 kb on + strand, within Pf6N2E2_2805 at 3291.378 kb on - strand, within Pf6N2E2_2805 at 3291.378 kb on - strand, within Pf6N2E2_2805 at 3291.378 kb on - strand, within Pf6N2E2_2805 at 3291.378 kb on - strand, within Pf6N2E2_2805 at 3291.378 kb on - strand, within Pf6N2E2_2805 at 3291.378 kb on - strand, within Pf6N2E2_2805 at 3291.378 kb on - strand, within Pf6N2E2_2805 at 3291.378 kb on - strand, within Pf6N2E2_2805 at 3291.554 kb on + strand, within Pf6N2E2_2805 at 3291.555 kb on - strand, within Pf6N2E2_2805 at 3291.594 kb on - strand, within Pf6N2E2_2805 at 3291.659 kb on + strand, within Pf6N2E2_2805 at 3291.659 kb on + strand, within Pf6N2E2_2805 at 3291.659 kb on + strand, within Pf6N2E2_2805 at 3291.659 kb on + strand, within Pf6N2E2_2805 at 3291.659 kb on + strand, within Pf6N2E2_2805 at 3291.659 kb on + strand, within Pf6N2E2_2805 at 3291.659 kb on + strand, within Pf6N2E2_2805 at 3291.660 kb on - strand, within Pf6N2E2_2805 at 3291.660 kb on - strand, within Pf6N2E2_2805 at 3291.660 kb on - strand, within Pf6N2E2_2805 at 3291.660 kb on - strand, within Pf6N2E2_2805 at 3291.786 kb on - strand at 3291.786 kb on - strand at 3291.786 kb on - strand at 3291.786 kb on - strand at 3291.797 kb on + strand at 3291.797 kb on + strand at 3291.798 kb on - strand at 3291.798 kb on - strand at 3291.861 kb on + strand at 3291.861 kb on + strand at 3291.862 kb on - strand at 3291.862 kb on - strand at 3291.862 kb on - strand at 3291.877 kb on + strand at 3291.878 kb on - strand at 3291.883 kb on + strand at 3291.883 kb on + strand at 3291.891 kb on + strand at 3291.911 kb on - strand at 3291.921 kb on + strand at 3291.922 kb on - strand at 3291.922 kb on - strand at 3291.922 kb on - strand at 3291.974 kb on + strand at 3291.975 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cerium(III) chloride 0.000195313 M remove 3,289,944 + Pf6N2E2_2803 0.30 +0.7 3,289,945 - Pf6N2E2_2803 0.30 -0.7 3,290,074 - Pf6N2E2_2803 0.42 -0.3 3,290,074 - Pf6N2E2_2803 0.42 -0.2 3,290,074 - Pf6N2E2_2803 0.42 +0.1 3,290,193 + Pf6N2E2_2803 0.54 +0.2 3,290,193 + Pf6N2E2_2803 0.54 -0.3 3,290,379 + Pf6N2E2_2803 0.72 -0.0 3,290,380 - Pf6N2E2_2803 0.72 +0.3 3,290,380 - Pf6N2E2_2803 0.72 +0.4 3,290,380 - Pf6N2E2_2803 0.72 -0.3 3,290,380 - Pf6N2E2_2803 0.72 +0.1 3,290,394 + Pf6N2E2_2803 0.74 -0.1 3,290,517 + Pf6N2E2_2803 0.86 +1.0 3,290,517 + Pf6N2E2_2803 0.86 +0.8 3,290,518 - Pf6N2E2_2803 0.86 -1.7 3,290,559 + -1.2 3,290,559 + +0.2 3,290,560 - +1.0 3,290,681 - +0.2 3,290,921 + Pf6N2E2_2804 0.27 +0.9 3,290,921 + Pf6N2E2_2804 0.27 -1.1 3,290,921 + Pf6N2E2_2804 0.27 -0.3 3,290,922 - Pf6N2E2_2804 0.28 -0.7 3,290,972 + Pf6N2E2_2804 0.42 -0.1 3,290,972 + Pf6N2E2_2804 0.42 +0.1 3,290,972 + Pf6N2E2_2804 0.42 -0.4 3,290,972 + Pf6N2E2_2804 0.42 -0.4 3,290,972 + Pf6N2E2_2804 0.42 +0.3 3,290,973 - Pf6N2E2_2804 0.42 -1.4 3,290,973 - Pf6N2E2_2804 0.42 -0.0 3,290,973 - Pf6N2E2_2804 0.42 -0.9 3,291,005 + Pf6N2E2_2804 0.52 -0.9 3,291,005 + Pf6N2E2_2804 0.52 -1.4 3,291,005 + Pf6N2E2_2804 0.52 +1.1 3,291,074 + Pf6N2E2_2804 0.72 -0.0 3,291,074 + Pf6N2E2_2804 0.72 -0.7 3,291,074 + Pf6N2E2_2804 0.72 +0.2 3,291,074 + Pf6N2E2_2804 0.72 -0.4 3,291,074 + Pf6N2E2_2804 0.72 -0.4 3,291,074 + Pf6N2E2_2804 0.72 -0.6 3,291,075 - Pf6N2E2_2804 0.72 -1.1 3,291,075 - Pf6N2E2_2804 0.72 +0.6 3,291,075 - Pf6N2E2_2804 0.72 +0.4 3,291,075 - +1.0 3,291,075 - Pf6N2E2_2804 0.72 -0.8 3,291,119 - Pf6N2E2_2804 0.85 +0.8 3,291,208 + -0.5 3,291,208 + +0.7 3,291,251 + -0.2 3,291,251 + +0.2 3,291,252 - -1.5 3,291,252 - -0.8 3,291,252 - +1.8 3,291,252 - +0.3 3,291,252 - +0.0 3,291,254 + +0.4 3,291,254 + -0.5 3,291,254 + +0.1 3,291,254 + -0.8 3,291,254 + +0.3 3,291,254 + -1.4 3,291,254 + -0.0 3,291,254 + +0.2 3,291,255 - +0.7 3,291,255 - -0.6 3,291,255 - -0.4 3,291,255 - -1.6 3,291,255 - +0.5 3,291,255 - -0.2 3,291,255 - +0.8 3,291,255 - +0.7 3,291,255 - +0.4 3,291,255 - +0.1 3,291,376 - Pf6N2E2_2805 0.21 +1.4 3,291,377 + Pf6N2E2_2805 0.21 -0.1 3,291,377 + Pf6N2E2_2805 0.21 -0.1 3,291,377 + Pf6N2E2_2805 0.21 -0.3 3,291,377 + Pf6N2E2_2805 0.21 +0.3 3,291,377 + Pf6N2E2_2805 0.21 -0.8 3,291,377 + Pf6N2E2_2805 0.21 +0.8 3,291,377 + Pf6N2E2_2805 0.21 -0.1 3,291,377 + Pf6N2E2_2805 0.21 +0.3 3,291,377 + Pf6N2E2_2805 0.21 -0.4 3,291,377 + Pf6N2E2_2805 0.21 +0.1 3,291,378 - Pf6N2E2_2805 0.21 -0.5 3,291,378 - Pf6N2E2_2805 0.21 +0.0 3,291,378 - Pf6N2E2_2805 0.21 -0.2 3,291,378 - Pf6N2E2_2805 0.21 +0.1 3,291,378 - Pf6N2E2_2805 0.21 +0.7 3,291,378 - Pf6N2E2_2805 0.21 -0.9 3,291,378 - Pf6N2E2_2805 0.21 +0.8 3,291,378 - Pf6N2E2_2805 0.21 +1.2 3,291,554 + Pf6N2E2_2805 0.52 +0.2 3,291,555 - Pf6N2E2_2805 0.52 -0.4 3,291,594 - Pf6N2E2_2805 0.59 +0.4 3,291,659 + Pf6N2E2_2805 0.70 -0.0 3,291,659 + Pf6N2E2_2805 0.70 -0.4 3,291,659 + Pf6N2E2_2805 0.70 +0.2 3,291,659 + Pf6N2E2_2805 0.70 +0.8 3,291,659 + Pf6N2E2_2805 0.70 +0.4 3,291,659 + Pf6N2E2_2805 0.70 +0.6 3,291,659 + Pf6N2E2_2805 0.70 +0.8 3,291,660 - Pf6N2E2_2805 0.70 -0.3 3,291,660 - Pf6N2E2_2805 0.70 +0.4 3,291,660 - Pf6N2E2_2805 0.70 +0.7 3,291,660 - Pf6N2E2_2805 0.70 -1.1 3,291,786 - +0.2 3,291,786 - -2.1 3,291,786 - -0.2 3,291,786 - -0.4 3,291,797 + -0.0 3,291,797 + -0.7 3,291,798 - +0.3 3,291,798 - -0.1 3,291,861 + -0.5 3,291,861 + +0.8 3,291,862 - +0.7 3,291,862 - +1.1 3,291,862 - +0.1 3,291,877 + +0.3 3,291,878 - +0.4 3,291,883 + +0.9 3,291,883 + +0.3 3,291,891 + +1.0 3,291,911 - -0.7 3,291,921 + +0.5 3,291,922 - -0.3 3,291,922 - +1.1 3,291,922 - -0.3 3,291,974 + +0.7 3,291,975 - -0.4
Or see this region's nucleotide sequence