Experiment: Cerium(III) chloride 0.000195313 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2482 and Pf6N2E2_2483 are separated by 236 nucleotides Pf6N2E2_2483 and Pf6N2E2_2484 are separated by 153 nucleotides
Pf6N2E2_2482 - Transglycosylase, Slt family, at 2,927,780 to 2,929,201
_2482
Pf6N2E2_2483 - Deoxyribonuclease TatD, at 2,929,438 to 2,930,247
_2483
Pf6N2E2_2484 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 2,930,401 to 2,931,882
_2484
Position (kb)
2929
2930
2931 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2928.459 kb on + strand, within Pf6N2E2_2482 at 2928.460 kb on - strand, within Pf6N2E2_2482 at 2928.599 kb on + strand, within Pf6N2E2_2482 at 2928.599 kb on + strand, within Pf6N2E2_2482 at 2928.600 kb on - strand, within Pf6N2E2_2482 at 2928.747 kb on + strand, within Pf6N2E2_2482 at 2928.748 kb on - strand, within Pf6N2E2_2482 at 2928.793 kb on + strand, within Pf6N2E2_2482 at 2928.881 kb on + strand, within Pf6N2E2_2482 at 2928.882 kb on - strand, within Pf6N2E2_2482 at 2928.963 kb on + strand, within Pf6N2E2_2482 at 2928.964 kb on - strand, within Pf6N2E2_2482 at 2928.964 kb on - strand, within Pf6N2E2_2482 at 2928.964 kb on - strand, within Pf6N2E2_2482 at 2928.964 kb on - strand, within Pf6N2E2_2482 at 2928.990 kb on + strand, within Pf6N2E2_2482 at 2929.178 kb on + strand at 2929.178 kb on + strand at 2929.179 kb on - strand at 2929.179 kb on - strand at 2929.179 kb on - strand at 2929.219 kb on + strand at 2929.220 kb on - strand at 2929.319 kb on - strand at 2929.321 kb on - strand at 2929.369 kb on + strand at 2929.370 kb on - strand at 2929.370 kb on - strand at 2929.386 kb on + strand at 2929.389 kb on - strand at 2929.394 kb on + strand at 2929.394 kb on + strand at 2929.395 kb on - strand at 2929.405 kb on + strand at 2929.432 kb on - strand at 2929.516 kb on + strand at 2929.946 kb on - strand, within Pf6N2E2_2483 at 2930.129 kb on - strand, within Pf6N2E2_2483 at 2930.153 kb on + strand, within Pf6N2E2_2483 at 2930.154 kb on - strand, within Pf6N2E2_2483 at 2930.154 kb on - strand, within Pf6N2E2_2483 at 2930.245 kb on + strand at 2930.272 kb on + strand at 2930.275 kb on + strand at 2930.276 kb on - strand at 2930.276 kb on - strand at 2930.276 kb on - strand at 2930.416 kb on - strand at 2930.421 kb on + strand at 2930.421 kb on + strand at 2930.421 kb on + strand at 2930.421 kb on + strand at 2930.421 kb on + strand at 2930.421 kb on + strand at 2930.422 kb on - strand at 2930.422 kb on - strand at 2930.422 kb on - strand at 2930.434 kb on + strand at 2930.491 kb on + strand at 2930.492 kb on - strand at 2930.605 kb on + strand, within Pf6N2E2_2484 at 2930.605 kb on + strand, within Pf6N2E2_2484 at 2930.606 kb on - strand, within Pf6N2E2_2484 at 2930.606 kb on - strand, within Pf6N2E2_2484 at 2930.606 kb on - strand, within Pf6N2E2_2484 at 2930.606 kb on - strand, within Pf6N2E2_2484 at 2930.894 kb on + strand, within Pf6N2E2_2484 at 2930.895 kb on - strand, within Pf6N2E2_2484 at 2930.916 kb on + strand, within Pf6N2E2_2484 at 2930.916 kb on + strand, within Pf6N2E2_2484 at 2930.916 kb on + strand, within Pf6N2E2_2484 at 2930.916 kb on + strand, within Pf6N2E2_2484 at 2930.917 kb on - strand, within Pf6N2E2_2484 at 2930.917 kb on - strand, within Pf6N2E2_2484 at 2930.917 kb on - strand, within Pf6N2E2_2484 at 2930.917 kb on - strand, within Pf6N2E2_2484 at 2931.194 kb on - strand, within Pf6N2E2_2484
Per-strain Table
Position Strand Gene LocusTag Fraction Cerium(III) chloride 0.000195313 M remove 2,928,459 + Pf6N2E2_2482 0.48 -0.9 2,928,460 - Pf6N2E2_2482 0.48 -0.4 2,928,599 + Pf6N2E2_2482 0.58 +0.9 2,928,599 + Pf6N2E2_2482 0.58 +0.8 2,928,600 - Pf6N2E2_2482 0.58 +0.1 2,928,747 + Pf6N2E2_2482 0.68 +0.6 2,928,748 - Pf6N2E2_2482 0.68 +0.2 2,928,793 + Pf6N2E2_2482 0.71 -0.3 2,928,881 + Pf6N2E2_2482 0.77 +0.0 2,928,882 - Pf6N2E2_2482 0.77 -0.3 2,928,963 + Pf6N2E2_2482 0.83 -0.2 2,928,964 - Pf6N2E2_2482 0.83 +0.9 2,928,964 - Pf6N2E2_2482 0.83 -1.5 2,928,964 - Pf6N2E2_2482 0.83 -0.7 2,928,964 - Pf6N2E2_2482 0.83 +0.7 2,928,990 + Pf6N2E2_2482 0.85 +0.8 2,929,178 + +0.1 2,929,178 + +0.0 2,929,179 - +0.9 2,929,179 - -0.5 2,929,179 - +0.3 2,929,219 + +0.4 2,929,220 - +0.2 2,929,319 - +0.7 2,929,321 - +0.3 2,929,369 + +0.3 2,929,370 - +0.2 2,929,370 - +0.4 2,929,386 + -1.9 2,929,389 - -0.3 2,929,394 + -0.3 2,929,394 + -0.1 2,929,395 - -0.5 2,929,405 + +0.3 2,929,432 - -0.1 2,929,516 + -0.1 2,929,946 - Pf6N2E2_2483 0.63 +1.0 2,930,129 - Pf6N2E2_2483 0.85 -1.6 2,930,153 + Pf6N2E2_2483 0.88 -0.7 2,930,154 - Pf6N2E2_2483 0.88 +0.2 2,930,154 - Pf6N2E2_2483 0.88 -1.4 2,930,245 + +0.1 2,930,272 + +1.4 2,930,275 + +0.3 2,930,276 - -1.6 2,930,276 - -0.5 2,930,276 - +0.1 2,930,416 - +0.4 2,930,421 + +1.6 2,930,421 + +0.5 2,930,421 + -0.2 2,930,421 + -0.8 2,930,421 + +1.8 2,930,421 + +1.2 2,930,422 - -0.2 2,930,422 - +0.8 2,930,422 - +3.4 2,930,434 + +0.1 2,930,491 + +0.7 2,930,492 - +0.3 2,930,605 + Pf6N2E2_2484 0.14 -0.3 2,930,605 + Pf6N2E2_2484 0.14 +1.3 2,930,606 - Pf6N2E2_2484 0.14 -0.1 2,930,606 - Pf6N2E2_2484 0.14 +1.8 2,930,606 - Pf6N2E2_2484 0.14 -0.2 2,930,606 - Pf6N2E2_2484 0.14 +0.4 2,930,894 + Pf6N2E2_2484 0.33 +0.1 2,930,895 - Pf6N2E2_2484 0.33 -0.8 2,930,916 + Pf6N2E2_2484 0.35 -0.3 2,930,916 + Pf6N2E2_2484 0.35 -0.3 2,930,916 + Pf6N2E2_2484 0.35 +0.5 2,930,916 + Pf6N2E2_2484 0.35 +0.7 2,930,917 - Pf6N2E2_2484 0.35 -1.1 2,930,917 - Pf6N2E2_2484 0.35 -0.5 2,930,917 - Pf6N2E2_2484 0.35 -0.5 2,930,917 - Pf6N2E2_2484 0.35 +1.0 2,931,194 - Pf6N2E2_2484 0.54 +0.6
Or see this region's nucleotide sequence