Experiment: Cerium(III) chloride 0.000195313 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2302 and Pf6N2E2_2303 are separated by 86 nucleotides Pf6N2E2_2303 and Pf6N2E2_2304 are separated by 91 nucleotides Pf6N2E2_2304 and Pf6N2E2_2305 are separated by 96 nucleotides
Pf6N2E2_2302 - CAAX amino terminal protease family protein, at 2,727,208 to 2,727,996
_2302
Pf6N2E2_2303 - Aerotaxis receptor Aer, at 2,728,083 to 2,729,648
_2303
Pf6N2E2_2304 - Predicted hydrolase of the alpha/beta-hydrolase fold, at 2,729,740 to 2,730,432
_2304
Pf6N2E2_2305 - Cytochrome c oxidase subunit CcoN (EC 1.9.3.1), at 2,730,529 to 2,731,953
_2305
Position (kb)
2728
2729
2730 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2727.100 kb on + strand at 2727.101 kb on - strand at 2727.101 kb on - strand at 2727.101 kb on - strand at 2727.101 kb on - strand at 2727.120 kb on + strand at 2727.121 kb on - strand at 2727.121 kb on - strand at 2727.157 kb on - strand at 2727.187 kb on + strand at 2727.188 kb on - strand at 2727.188 kb on - strand at 2727.207 kb on + strand at 2727.207 kb on + strand at 2727.207 kb on + strand at 2727.207 kb on + strand at 2727.207 kb on + strand at 2727.207 kb on + strand at 2727.208 kb on - strand at 2727.208 kb on - strand at 2727.208 kb on - strand at 2727.208 kb on - strand at 2727.208 kb on - strand at 2727.208 kb on - strand at 2727.208 kb on - strand at 2727.208 kb on - strand at 2727.208 kb on - strand at 2727.208 kb on - strand at 2727.219 kb on - strand at 2727.230 kb on - strand at 2727.380 kb on + strand, within Pf6N2E2_2302 at 2727.380 kb on + strand, within Pf6N2E2_2302 at 2727.380 kb on + strand, within Pf6N2E2_2302 at 2727.380 kb on + strand, within Pf6N2E2_2302 at 2727.380 kb on + strand, within Pf6N2E2_2302 at 2727.380 kb on + strand, within Pf6N2E2_2302 at 2727.381 kb on - strand, within Pf6N2E2_2302 at 2727.381 kb on - strand, within Pf6N2E2_2302 at 2727.381 kb on - strand, within Pf6N2E2_2302 at 2727.389 kb on + strand, within Pf6N2E2_2302 at 2727.490 kb on + strand, within Pf6N2E2_2302 at 2727.490 kb on + strand, within Pf6N2E2_2302 at 2727.490 kb on + strand, within Pf6N2E2_2302 at 2727.491 kb on - strand, within Pf6N2E2_2302 at 2727.491 kb on - strand, within Pf6N2E2_2302 at 2727.580 kb on + strand, within Pf6N2E2_2302 at 2727.708 kb on - strand, within Pf6N2E2_2302 at 2727.745 kb on + strand, within Pf6N2E2_2302 at 2727.745 kb on + strand, within Pf6N2E2_2302 at 2727.746 kb on - strand, within Pf6N2E2_2302 at 2727.836 kb on + strand, within Pf6N2E2_2302 at 2727.971 kb on + strand at 2727.972 kb on - strand at 2727.972 kb on - strand at 2727.975 kb on + strand at 2727.975 kb on + strand at 2727.975 kb on + strand at 2727.975 kb on + strand at 2727.976 kb on - strand at 2728.023 kb on + strand at 2728.052 kb on + strand at 2728.089 kb on - strand at 2728.176 kb on + strand at 2728.176 kb on + strand at 2728.375 kb on - strand, within Pf6N2E2_2303 at 2728.375 kb on - strand, within Pf6N2E2_2303 at 2728.375 kb on - strand, within Pf6N2E2_2303 at 2728.375 kb on - strand, within Pf6N2E2_2303 at 2728.375 kb on - strand, within Pf6N2E2_2303 at 2728.470 kb on + strand, within Pf6N2E2_2303 at 2728.470 kb on + strand, within Pf6N2E2_2303 at 2728.470 kb on + strand, within Pf6N2E2_2303 at 2728.471 kb on - strand, within Pf6N2E2_2303 at 2728.734 kb on + strand, within Pf6N2E2_2303 at 2728.734 kb on + strand, within Pf6N2E2_2303 at 2728.735 kb on - strand, within Pf6N2E2_2303 at 2728.735 kb on - strand, within Pf6N2E2_2303 at 2728.735 kb on - strand, within Pf6N2E2_2303 at 2728.735 kb on - strand, within Pf6N2E2_2303 at 2728.866 kb on - strand, within Pf6N2E2_2303 at 2728.878 kb on - strand, within Pf6N2E2_2303 at 2728.878 kb on - strand, within Pf6N2E2_2303 at 2729.531 kb on + strand at 2729.531 kb on + strand at 2729.532 kb on - strand at 2729.532 kb on - strand at 2729.612 kb on + strand at 2729.612 kb on + strand at 2729.640 kb on - strand at 2729.787 kb on + strand at 2729.787 kb on + strand at 2729.788 kb on - strand at 2729.788 kb on - strand at 2729.788 kb on - strand at 2729.788 kb on - strand at 2729.999 kb on + strand, within Pf6N2E2_2304 at 2729.999 kb on + strand, within Pf6N2E2_2304 at 2729.999 kb on + strand, within Pf6N2E2_2304 at 2730.000 kb on - strand, within Pf6N2E2_2304 at 2730.000 kb on - strand, within Pf6N2E2_2304 at 2730.000 kb on - strand, within Pf6N2E2_2304 at 2730.000 kb on - strand, within Pf6N2E2_2304 at 2730.000 kb on - strand, within Pf6N2E2_2304 at 2730.000 kb on - strand, within Pf6N2E2_2304 at 2730.064 kb on - strand, within Pf6N2E2_2304 at 2730.064 kb on - strand, within Pf6N2E2_2304 at 2730.111 kb on - strand, within Pf6N2E2_2304 at 2730.128 kb on + strand, within Pf6N2E2_2304 at 2730.129 kb on - strand, within Pf6N2E2_2304 at 2730.210 kb on - strand, within Pf6N2E2_2304 at 2730.210 kb on - strand, within Pf6N2E2_2304 at 2730.210 kb on - strand, within Pf6N2E2_2304 at 2730.456 kb on + strand at 2730.456 kb on + strand at 2730.540 kb on + strand at 2730.541 kb on - strand at 2730.554 kb on - strand at 2730.559 kb on + strand at 2730.559 kb on + strand at 2730.559 kb on + strand at 2730.560 kb on - strand at 2730.560 kb on - strand at 2730.560 kb on - strand at 2730.585 kb on + strand at 2730.586 kb on - strand at 2730.586 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cerium(III) chloride 0.000195313 M remove 2,727,100 + +1.0 2,727,101 - -0.2 2,727,101 - -0.0 2,727,101 - +0.1 2,727,101 - +1.1 2,727,120 + +1.3 2,727,121 - -0.1 2,727,121 - +0.1 2,727,157 - +0.4 2,727,187 + +1.2 2,727,188 - +0.0 2,727,188 - +0.7 2,727,207 + +0.4 2,727,207 + +0.1 2,727,207 + +1.3 2,727,207 + -0.1 2,727,207 + +0.7 2,727,207 + -1.0 2,727,208 - +0.4 2,727,208 - +0.5 2,727,208 - +0.4 2,727,208 - +0.1 2,727,208 - -0.7 2,727,208 - +0.4 2,727,208 - +1.0 2,727,208 - +0.8 2,727,208 - +0.8 2,727,208 - +0.3 2,727,219 - -0.1 2,727,230 - -0.3 2,727,380 + Pf6N2E2_2302 0.22 -2.3 2,727,380 + Pf6N2E2_2302 0.22 -0.0 2,727,380 + Pf6N2E2_2302 0.22 -0.2 2,727,380 + Pf6N2E2_2302 0.22 -0.7 2,727,380 + Pf6N2E2_2302 0.22 -0.5 2,727,380 + Pf6N2E2_2302 0.22 -0.8 2,727,381 - Pf6N2E2_2302 0.22 -0.2 2,727,381 - Pf6N2E2_2302 0.22 +0.6 2,727,381 - Pf6N2E2_2302 0.22 +0.2 2,727,389 + Pf6N2E2_2302 0.23 -0.7 2,727,490 + Pf6N2E2_2302 0.36 +0.3 2,727,490 + Pf6N2E2_2302 0.36 -0.7 2,727,490 + Pf6N2E2_2302 0.36 +0.5 2,727,491 - Pf6N2E2_2302 0.36 -0.9 2,727,491 - Pf6N2E2_2302 0.36 +0.1 2,727,580 + Pf6N2E2_2302 0.47 -0.4 2,727,708 - Pf6N2E2_2302 0.63 -0.7 2,727,745 + Pf6N2E2_2302 0.68 +0.3 2,727,745 + Pf6N2E2_2302 0.68 +1.1 2,727,746 - Pf6N2E2_2302 0.68 +0.2 2,727,836 + Pf6N2E2_2302 0.80 -0.1 2,727,971 + -0.1 2,727,972 - +0.2 2,727,972 - -0.5 2,727,975 + -0.5 2,727,975 + +0.3 2,727,975 + -0.8 2,727,975 + +0.2 2,727,976 - +0.0 2,728,023 + -0.9 2,728,052 + -0.1 2,728,089 - -0.0 2,728,176 + +0.5 2,728,176 + +0.7 2,728,375 - Pf6N2E2_2303 0.19 -0.4 2,728,375 - Pf6N2E2_2303 0.19 +1.6 2,728,375 - Pf6N2E2_2303 0.19 +0.6 2,728,375 - Pf6N2E2_2303 0.19 +0.4 2,728,375 - Pf6N2E2_2303 0.19 -1.0 2,728,470 + Pf6N2E2_2303 0.25 -0.2 2,728,470 + Pf6N2E2_2303 0.25 +0.2 2,728,470 + Pf6N2E2_2303 0.25 +0.6 2,728,471 - Pf6N2E2_2303 0.25 +0.5 2,728,734 + Pf6N2E2_2303 0.42 +0.6 2,728,734 + Pf6N2E2_2303 0.42 +0.6 2,728,735 - Pf6N2E2_2303 0.42 +0.4 2,728,735 - Pf6N2E2_2303 0.42 +1.6 2,728,735 - Pf6N2E2_2303 0.42 -0.5 2,728,735 - Pf6N2E2_2303 0.42 +0.3 2,728,866 - Pf6N2E2_2303 0.50 +0.3 2,728,878 - Pf6N2E2_2303 0.51 -0.1 2,728,878 - Pf6N2E2_2303 0.51 +0.6 2,729,531 + -0.4 2,729,531 + +0.2 2,729,532 - +0.5 2,729,532 - -0.8 2,729,612 + -0.2 2,729,612 + -0.6 2,729,640 - +0.0 2,729,787 + +0.5 2,729,787 + +0.4 2,729,788 - -1.1 2,729,788 - +0.1 2,729,788 - +0.3 2,729,788 - -0.1 2,729,999 + Pf6N2E2_2304 0.37 -0.0 2,729,999 + Pf6N2E2_2304 0.37 -0.2 2,729,999 + Pf6N2E2_2304 0.37 -0.5 2,730,000 - Pf6N2E2_2304 0.38 +0.0 2,730,000 - Pf6N2E2_2304 0.38 -0.7 2,730,000 - Pf6N2E2_2304 0.38 -1.6 2,730,000 - Pf6N2E2_2304 0.38 -0.3 2,730,000 - Pf6N2E2_2304 0.38 +0.5 2,730,000 - Pf6N2E2_2304 0.38 -0.9 2,730,064 - Pf6N2E2_2304 0.47 -0.0 2,730,064 - Pf6N2E2_2304 0.47 +0.4 2,730,111 - Pf6N2E2_2304 0.54 +1.1 2,730,128 + Pf6N2E2_2304 0.56 +0.7 2,730,129 - Pf6N2E2_2304 0.56 -0.0 2,730,210 - Pf6N2E2_2304 0.68 +0.2 2,730,210 - Pf6N2E2_2304 0.68 -0.4 2,730,210 - Pf6N2E2_2304 0.68 -0.5 2,730,456 + +1.8 2,730,456 + -0.3 2,730,540 + -0.1 2,730,541 - -0.3 2,730,554 - +0.1 2,730,559 + -0.2 2,730,559 + +0.1 2,730,559 + +0.8 2,730,560 - -0.1 2,730,560 - -1.1 2,730,560 - -1.6 2,730,585 + -1.5 2,730,586 - +0.3 2,730,586 - +0.3
Or see this region's nucleotide sequence