Experiment: Cerium(III) chloride 0.000195313 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2002 and Pf6N2E2_2003 are separated by 471 nucleotides
Pf6N2E2_2002 - hypothetical protein, at 2,372,980 to 2,374,761
_2002
Pf6N2E2_2003 - hypothetical protein, at 2,375,233 to 2,376,387
_2003
Position (kb)
2375
2376
2377 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2374.387 kb on - strand, within Pf6N2E2_2002 at 2374.389 kb on + strand, within Pf6N2E2_2002 at 2375.066 kb on - strand at 2375.600 kb on + strand, within Pf6N2E2_2003 at 2375.670 kb on + strand, within Pf6N2E2_2003 at 2375.797 kb on - strand, within Pf6N2E2_2003 at 2375.938 kb on + strand, within Pf6N2E2_2003 at 2376.155 kb on + strand, within Pf6N2E2_2003 at 2376.342 kb on + strand at 2376.387 kb on + strand at 2376.455 kb on + strand at 2376.455 kb on + strand at 2376.641 kb on - strand at 2376.641 kb on - strand at 2376.662 kb on - strand at 2376.681 kb on - strand at 2376.681 kb on - strand at 2376.715 kb on + strand at 2376.715 kb on + strand at 2376.716 kb on - strand at 2376.716 kb on - strand at 2376.716 kb on - strand at 2376.716 kb on - strand at 2376.723 kb on + strand at 2376.724 kb on - strand at 2376.724 kb on - strand at 2376.724 kb on - strand at 2376.724 kb on - strand at 2376.724 kb on - strand at 2376.822 kb on + strand at 2376.822 kb on + strand at 2376.956 kb on + strand at 2376.977 kb on - strand at 2376.977 kb on - strand at 2376.979 kb on - strand at 2377.143 kb on + strand at 2377.143 kb on + strand at 2377.143 kb on + strand at 2377.186 kb on + strand at 2377.187 kb on - strand at 2377.347 kb on - strand at 2377.352 kb on + strand at 2377.352 kb on + strand at 2377.352 kb on + strand at 2377.353 kb on - strand at 2377.353 kb on - strand at 2377.353 kb on - strand at 2377.369 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cerium(III) chloride 0.000195313 M remove 2,374,387 - Pf6N2E2_2002 0.79 +1.3 2,374,389 + Pf6N2E2_2002 0.79 -0.3 2,375,066 - +0.6 2,375,600 + Pf6N2E2_2003 0.32 -1.9 2,375,670 + Pf6N2E2_2003 0.38 -2.3 2,375,797 - Pf6N2E2_2003 0.49 +0.6 2,375,938 + Pf6N2E2_2003 0.61 +0.6 2,376,155 + Pf6N2E2_2003 0.80 -0.7 2,376,342 + -0.3 2,376,387 + -0.0 2,376,455 + +0.5 2,376,455 + -0.1 2,376,641 - +0.3 2,376,641 - +0.1 2,376,662 - +0.5 2,376,681 - +0.7 2,376,681 - +0.2 2,376,715 + -0.7 2,376,715 + -0.3 2,376,716 - -1.1 2,376,716 - +0.3 2,376,716 - -0.2 2,376,716 - +0.5 2,376,723 + +1.3 2,376,724 - +0.7 2,376,724 - +0.7 2,376,724 - -0.4 2,376,724 - -0.1 2,376,724 - -0.3 2,376,822 + +1.3 2,376,822 + +1.2 2,376,956 + -0.6 2,376,977 - -1.0 2,376,977 - +0.3 2,376,979 - +1.3 2,377,143 + +1.9 2,377,143 + -0.5 2,377,143 + +0.7 2,377,186 + -0.4 2,377,187 - -0.1 2,377,347 - -0.7 2,377,352 + +0.4 2,377,352 + -0.2 2,377,352 + -0.3 2,377,353 - +1.4 2,377,353 - +0.1 2,377,353 - -0.0 2,377,369 - -0.4
Or see this region's nucleotide sequence