Experiment: Cerium(III) chloride 0.000195313 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1730 and Pf6N2E2_1731 are separated by 33 nucleotides Pf6N2E2_1731 and Pf6N2E2_1732 are separated by 345 nucleotides Pf6N2E2_1732 and Pf6N2E2_1733 are separated by 23 nucleotides
Pf6N2E2_1730 - Quinone oxidoreductase (EC 1.6.5.5), at 2,042,533 to 2,043,507
_1730
Pf6N2E2_1731 - Transcriptional regulator, LysR family, at 2,043,541 to 2,044,464
_1731
Pf6N2E2_1732 - hypothetical protein, at 2,044,810 to 2,045,049
_1732
Pf6N2E2_1733 - Oligopeptide transporter, OPT family, at 2,045,073 to 2,046,818
_1733
Position (kb)
2043
2044
2045 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2042.649 kb on + strand, within Pf6N2E2_1730 at 2042.656 kb on + strand, within Pf6N2E2_1730 at 2042.657 kb on - strand, within Pf6N2E2_1730 at 2042.657 kb on - strand, within Pf6N2E2_1730 at 2042.788 kb on + strand, within Pf6N2E2_1730 at 2042.788 kb on + strand, within Pf6N2E2_1730 at 2042.789 kb on - strand, within Pf6N2E2_1730 at 2042.917 kb on + strand, within Pf6N2E2_1730 at 2042.918 kb on - strand, within Pf6N2E2_1730 at 2042.918 kb on - strand, within Pf6N2E2_1730 at 2042.935 kb on + strand, within Pf6N2E2_1730 at 2042.935 kb on + strand, within Pf6N2E2_1730 at 2042.935 kb on + strand, within Pf6N2E2_1730 at 2042.936 kb on - strand, within Pf6N2E2_1730 at 2042.968 kb on + strand, within Pf6N2E2_1730 at 2042.968 kb on + strand, within Pf6N2E2_1730 at 2042.968 kb on + strand, within Pf6N2E2_1730 at 2042.968 kb on + strand, within Pf6N2E2_1730 at 2042.969 kb on - strand, within Pf6N2E2_1730 at 2042.969 kb on - strand, within Pf6N2E2_1730 at 2042.969 kb on - strand, within Pf6N2E2_1730 at 2043.169 kb on + strand, within Pf6N2E2_1730 at 2043.377 kb on + strand, within Pf6N2E2_1730 at 2043.427 kb on + strand at 2043.487 kb on - strand at 2043.934 kb on + strand, within Pf6N2E2_1731 at 2043.934 kb on + strand, within Pf6N2E2_1731 at 2043.935 kb on - strand, within Pf6N2E2_1731 at 2043.935 kb on - strand, within Pf6N2E2_1731 at 2043.935 kb on - strand, within Pf6N2E2_1731 at 2044.068 kb on + strand, within Pf6N2E2_1731 at 2044.116 kb on + strand, within Pf6N2E2_1731 at 2044.116 kb on + strand, within Pf6N2E2_1731 at 2044.117 kb on - strand, within Pf6N2E2_1731 at 2044.117 kb on - strand, within Pf6N2E2_1731 at 2044.117 kb on - strand, within Pf6N2E2_1731 at 2044.117 kb on - strand, within Pf6N2E2_1731 at 2044.117 kb on - strand, within Pf6N2E2_1731 at 2044.117 kb on - strand, within Pf6N2E2_1731 at 2044.117 kb on - strand, within Pf6N2E2_1731 at 2044.147 kb on + strand, within Pf6N2E2_1731 at 2044.147 kb on + strand, within Pf6N2E2_1731 at 2044.147 kb on + strand, within Pf6N2E2_1731 at 2044.190 kb on + strand, within Pf6N2E2_1731 at 2044.303 kb on + strand, within Pf6N2E2_1731 at 2044.304 kb on - strand, within Pf6N2E2_1731 at 2044.304 kb on - strand, within Pf6N2E2_1731 at 2044.304 kb on - strand, within Pf6N2E2_1731 at 2044.360 kb on + strand, within Pf6N2E2_1731 at 2044.360 kb on + strand, within Pf6N2E2_1731 at 2044.360 kb on + strand, within Pf6N2E2_1731 at 2044.360 kb on + strand, within Pf6N2E2_1731 at 2044.360 kb on + strand, within Pf6N2E2_1731 at 2044.360 kb on + strand, within Pf6N2E2_1731 at 2044.361 kb on - strand, within Pf6N2E2_1731 at 2044.361 kb on - strand, within Pf6N2E2_1731 at 2044.361 kb on - strand, within Pf6N2E2_1731 at 2044.361 kb on - strand, within Pf6N2E2_1731 at 2044.361 kb on - strand, within Pf6N2E2_1731 at 2044.462 kb on + strand at 2044.462 kb on + strand at 2044.463 kb on - strand at 2044.484 kb on - strand at 2044.775 kb on + strand at 2044.775 kb on + strand at 2044.776 kb on - strand at 2044.780 kb on - strand at 2044.822 kb on + strand at 2044.822 kb on + strand at 2044.823 kb on - strand at 2044.974 kb on + strand, within Pf6N2E2_1732 at 2044.974 kb on + strand, within Pf6N2E2_1732 at 2044.974 kb on + strand, within Pf6N2E2_1732 at 2044.974 kb on + strand, within Pf6N2E2_1732 at 2044.974 kb on + strand, within Pf6N2E2_1732 at 2044.974 kb on + strand, within Pf6N2E2_1732 at 2044.974 kb on + strand, within Pf6N2E2_1732 at 2044.975 kb on - strand, within Pf6N2E2_1732 at 2044.975 kb on - strand, within Pf6N2E2_1732 at 2044.975 kb on - strand, within Pf6N2E2_1732 at 2045.075 kb on - strand at 2045.087 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cerium(III) chloride 0.000195313 M remove 2,042,649 + Pf6N2E2_1730 0.12 +0.9 2,042,656 + Pf6N2E2_1730 0.13 -0.9 2,042,657 - Pf6N2E2_1730 0.13 -0.3 2,042,657 - Pf6N2E2_1730 0.13 +0.4 2,042,788 + Pf6N2E2_1730 0.26 +0.6 2,042,788 + Pf6N2E2_1730 0.26 -0.4 2,042,789 - Pf6N2E2_1730 0.26 -0.2 2,042,917 + Pf6N2E2_1730 0.39 +0.7 2,042,918 - Pf6N2E2_1730 0.39 +0.2 2,042,918 - Pf6N2E2_1730 0.39 +0.1 2,042,935 + Pf6N2E2_1730 0.41 -0.3 2,042,935 + Pf6N2E2_1730 0.41 +0.4 2,042,935 + Pf6N2E2_1730 0.41 -0.6 2,042,936 - Pf6N2E2_1730 0.41 +0.1 2,042,968 + Pf6N2E2_1730 0.45 -0.3 2,042,968 + Pf6N2E2_1730 0.45 -0.0 2,042,968 + Pf6N2E2_1730 0.45 +0.4 2,042,968 + Pf6N2E2_1730 0.45 +0.0 2,042,969 - Pf6N2E2_1730 0.45 -0.2 2,042,969 - Pf6N2E2_1730 0.45 +1.2 2,042,969 - Pf6N2E2_1730 0.45 -0.7 2,043,169 + Pf6N2E2_1730 0.65 -0.1 2,043,377 + Pf6N2E2_1730 0.87 +0.4 2,043,427 + -0.6 2,043,487 - +0.4 2,043,934 + Pf6N2E2_1731 0.43 +1.4 2,043,934 + Pf6N2E2_1731 0.43 -0.6 2,043,935 - Pf6N2E2_1731 0.43 +2.9 2,043,935 - Pf6N2E2_1731 0.43 +0.5 2,043,935 - Pf6N2E2_1731 0.43 +1.0 2,044,068 + Pf6N2E2_1731 0.57 +0.0 2,044,116 + Pf6N2E2_1731 0.62 +1.2 2,044,116 + Pf6N2E2_1731 0.62 +0.5 2,044,117 - Pf6N2E2_1731 0.62 +0.3 2,044,117 - Pf6N2E2_1731 0.62 -1.0 2,044,117 - Pf6N2E2_1731 0.62 +1.3 2,044,117 - Pf6N2E2_1731 0.62 -0.1 2,044,117 - Pf6N2E2_1731 0.62 +0.3 2,044,117 - Pf6N2E2_1731 0.62 +0.2 2,044,117 - Pf6N2E2_1731 0.62 +0.7 2,044,147 + Pf6N2E2_1731 0.66 +1.4 2,044,147 + Pf6N2E2_1731 0.66 +0.5 2,044,147 + Pf6N2E2_1731 0.66 +0.3 2,044,190 + Pf6N2E2_1731 0.70 -1.0 2,044,303 + Pf6N2E2_1731 0.82 +0.2 2,044,304 - Pf6N2E2_1731 0.83 +0.6 2,044,304 - Pf6N2E2_1731 0.83 +0.6 2,044,304 - Pf6N2E2_1731 0.83 -0.2 2,044,360 + Pf6N2E2_1731 0.89 +1.0 2,044,360 + Pf6N2E2_1731 0.89 +0.3 2,044,360 + Pf6N2E2_1731 0.89 -0.0 2,044,360 + Pf6N2E2_1731 0.89 +1.1 2,044,360 + Pf6N2E2_1731 0.89 +0.5 2,044,360 + Pf6N2E2_1731 0.89 -0.1 2,044,361 - Pf6N2E2_1731 0.89 +0.1 2,044,361 - Pf6N2E2_1731 0.89 +0.5 2,044,361 - Pf6N2E2_1731 0.89 +2.0 2,044,361 - Pf6N2E2_1731 0.89 +0.8 2,044,361 - Pf6N2E2_1731 0.89 +0.1 2,044,462 + +0.4 2,044,462 + +0.3 2,044,463 - -0.3 2,044,484 - -0.2 2,044,775 + -0.4 2,044,775 + +0.2 2,044,776 - -0.7 2,044,780 - +0.3 2,044,822 + -1.1 2,044,822 + -0.1 2,044,823 - -0.1 2,044,974 + Pf6N2E2_1732 0.68 -1.0 2,044,974 + Pf6N2E2_1732 0.68 -0.1 2,044,974 + Pf6N2E2_1732 0.68 +2.0 2,044,974 + Pf6N2E2_1732 0.68 -0.2 2,044,974 + Pf6N2E2_1732 0.68 +1.6 2,044,974 + Pf6N2E2_1732 0.68 -0.6 2,044,974 + Pf6N2E2_1732 0.68 -1.1 2,044,975 - Pf6N2E2_1732 0.69 -0.3 2,044,975 - Pf6N2E2_1732 0.69 +0.3 2,044,975 - Pf6N2E2_1732 0.69 +1.4 2,045,075 - +0.2 2,045,087 + +0.2
Or see this region's nucleotide sequence